RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CYB5D1Q6P9G0 228 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 ABRAXAS1Q6UWZ7 409 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 MFSD7Q6UXD7 560 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 ZC3H18Q86VM9 953 aaKnown RBP10.49□□□□□ -0.73
CAPN3-202ENST00000337571 CCDC50Q8IVM0 306 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 RCOR2Q8IZ40 523 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 SLC25A41Q8N5S1 370 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 ESX1Q8N693 406 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 HTR3CQ8WXA8 447 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 TADA1Q96BN2 335 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 ZDHHC12Q96GR4 267 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 SLC45A3Q96JT2 553 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 VAT1Q99536 393 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 LUC7LQ9NQ29 371 aaKnown RBP10.49□□□□□ -0.73
CAPN3-202ENST00000337571 NPDC1Q9NQX5 325 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-202ENST00000337571 POT1Q9NUX5 634 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 HACD3Q9P035 362 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF624Q9P2J8 865 aaPredicted RBP10.49□□□□□ -0.73
CAPN3-202ENST00000337571 TRIM10Q9UDY6 481 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 SLC23A2Q9UGH3 650 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 IL17BQ9UHF5 180 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 PKP3Q9Y446 797 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 HYOU1Q9Y4L1 999 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 PCDHB3Q9Y5E6 796 aa10.49□□□□□ -0.73
CAPN3-202ENST00000337571 SETXQ7Z333 2677 aaKnown RBP10.49□□□□□ -0.73
CAPN3-202ENST00000337571 LOC285095A0A1B0GVY8 99 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 AURKAO14965 403 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 NKX2-8O15522 239 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SUV39H1O43463 412 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 PSTPIP1O43586 416 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 MTX2O75431 263 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 ANKRD34CP0C6C1 535 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 PRKAR1AP10644 381 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 NFKB1P19838 968 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 TCN2P20062 427 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 CDKN2BP42772 138 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SEPHS1P49903 392 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 DRG2P55039 364 aaKnown RBP10.48□□□□□ -0.73
CAPN3-202ENST00000337571 POLE2P56282 527 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 WNT3AP56704 352 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 ITGA9Q13797 1035 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SEPT6Q14141 434 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 LLGL1Q15334 1064 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SPA17Q15506 151 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SIRPB2Q5JXA9 342 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 LDLRAP1Q5SW96 308 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 CCDC181Q5TID7 509 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 AGAP9Q5VTM2 703 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 KLHL35Q6PF15 583 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 C6orf15Q6UXA7 325 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-202ENST00000337571 WASH2PQ6VEQ5 465 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SPOCD1Q6ZMY3 1216 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 AMZ2Q86W34 360 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 RASGRP3Q8IV61 690 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 UNC5BQ8IZJ1 945 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 BLOC1S5Q8TDH9 187 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 OR6C1Q96RD1 312 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 FSD1LQ9BXM9 530 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 ULBP3Q9BZM4 244 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 APMAPQ9HDC9 416 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 WASH6PQ9NQA3 447 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SCHIP1Q9P0W5 487 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-202ENST00000337571 TRHDEQ9UKU6 1024 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 TMEM184BQ9Y519 407 aaPredicted RBP10.48□□□□□ -0.73
CAPN3-202ENST00000337571 SPO11Q9Y5K1 396 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 ALG6Q9Y672 507 aa10.48□□□□□ -0.73
CAPN3-202ENST00000337571 ASH1LQ9NR48 2969 aaKnown RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 LOC101059948A0A1B0GTJ6 334 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 OR52A4PA6NMU1 304 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 HACD1B0YJ81 288 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 C9P02748 559 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 SPAM1P38567 509 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 ARL4DP49703 201 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 GFERP55789 205 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 NFKB2Q00653 900 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 MPP3Q13368 585 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 MAP7Q14244 749 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 CACHD1Q5VU97 1274 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 IRGCQ6NXR0 463 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 C16orf46Q6P387 395 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 FAM92BQ6ZTR7 304 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 TIPARPQ7Z3E1 657 aaKnown RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 GLT6D1Q7Z4J2 308 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 PTRH1Q86Y79 214 aaKnown RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 ZNF547Q8IVP9 402 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 KATNAL2Q8IYT4 538 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 IPMKQ8NFU5 416 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 DTX3LQ8TDB6 740 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 APOBEC4Q8WW27 367 aaKnown RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 STAMBPL1Q96FJ0 436 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 RBM41Q96IZ5 413 aaKnown RBP10.47□□□□□ -0.73
CAPN3-202ENST00000337571 ELMO2Q96JJ3 720 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 FCRL5Q96RD9 977 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 SPRY4Q9C004 299 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 SLC40A1Q9NP59 571 aa10.47□□□□□ -0.73
CAPN3-202ENST00000337571 IL26Q9NPH9 171 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms