RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 FEM1AQ9BSK4 669 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 MRPL9Q9BYD2 267 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 CMTM6Q9NX76 183 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 CD84Q9UIB8 345 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 OAZ3Q9UMX2 235 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 SH3BP1Q9Y3L3 701 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 A0A1W2PQ67 120 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 PLOD2O00469 737 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 MTX2O75431 263 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 SNUPNO95149 360 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 MLYCDO95822 493 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ZNF7P17097 686 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 SLC6A2P23975 617 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 SLC26A3P40879 764 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 HK3P52790 923 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 INHBCP55103 352 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 PTGR1Q14914 329 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 AARS2Q5JTZ9 985 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 HS6ST3Q8IZP7 471 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 PDZD8Q8NEN9 1154 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 OR10Q1Q8NGQ4 319 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 RHEBL1Q8TAI7 183 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 CD200R1Q8TD46 325 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 SLCO4A1Q96BD0 722 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ZNF599Q96NL3 588 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 TRIB3Q96RU7 358 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 CDK5RAP1Q96SZ6 601 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 CLSTN3Q9BQT9 956 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 MRGBPQ9NV56 204 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 TMEM181Q9P2C4 612 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 MED16Q9Y2X0 877 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ARIH1Q9Y4X5 557 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 TDRD15B5MCY1 1934 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 FAM92AA1XBS5 289 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 KRT87PA6NCN2 255 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ARPC2O15144 300 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 SEC22BO75396 215 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 IGLV3-27P01718 113 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 IGHA2P01877 340 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 GNAO1P09471 354 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 UROSP10746 265 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 HOXB8P17481 243 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 GSK3BP49841 420 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ERVPABLB-1P60509 514 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 HTRA3P83110 453 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 DDX39BQ13838 428 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 BOP1Q14137 746 aaKnown RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 CTSL3PQ5NE16 218 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 LETMD1Q6P1Q0 360 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ST13P5Q8NFI4 369 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 OR4F6Q8NGB9 312 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 OR2T11Q8NH01 316 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 FBXO30Q8TB52 745 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 PYCR2Q96C36 320 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 HIC2Q96JB3 615 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 HOPXQ9BPY8 73 aaPredicted RBP9.6□□□□□ -0.87
MSL3-202ENST00000337339 BEGAINQ9BUH8 593 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 RNF208Q9H0X6 261 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ATP11BQ9Y2G3 1177 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 ZNF711Q9Y462 761 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 TSC2P49815 1807 aa9.6□□□□□ -0.87
MSL3-202ENST00000337339 TRIM24O15164 1050 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 HOXA2O43364 376 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 TFAP2AP05549 437 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 URODP06132 367 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 GSNP06396 782 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 AKT1P31749 480 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 HSPA13P48723 471 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 RGS4P49798 205 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 STK19P49842 368 aaPredicted RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 PRKG2Q13237 762 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 SLC14A2Q15849 920 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 DEFB115Q30KQ5 88 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 SLC44A4Q53GD3 710 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 SETMARQ53H47 684 aaPredicted RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 C6orf136Q5SQH8 315 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 KANK2Q63ZY3 851 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 CWF19L1Q69YN2 538 aaKnown RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 CHST15Q7LFX5 561 aaPredicted RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 TSPAN33Q86UF1 283 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 APLFQ8IW19 511 aaPredicted RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 MARVELD2Q8N4S9 558 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 TMIGD2Q96BF3 282 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 RMND5BQ96G75 393 aaPredicted RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 MYO19Q96H55 970 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 CREBZFQ9NS37 354 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 IL37Q9NZH6 218 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 PCTPQ9UKL6 214 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 SCN4AP35499 1836 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 FFAR2O15552 330 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 LRATO95237 230 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 ZNF26P17031 533 aaPredicted RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 ITGALP20701 1170 aa9.59□□□□□ -0.87
MSL3-202ENST00000337339 YAP1P46937 504 aaKnown RBP9.59□□□□□ -0.87
MSL3-202ENST00000337339 ACADVLP49748 655 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms