RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 RNF219Q5W0B1 726 aaPredicted RBP13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 TBPL2Q6SJ96 375 aa13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 SFRP1Q8N474 314 aa13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 NKAPQ8N5F7 415 aaKnown RBP13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 BHMTQ93088 406 aa13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 KCTD14Q9BQ13 255 aaPredicted RBP13.27□□□□□ -0.28
TUBA1B-201ENST00000332858 STX16O14662 325 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 SYNCRIPO60506 623 aaKnown RBP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 KATNA1O75449 491 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 CTPS1P17812 591 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 ITGB6P18564 788 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 HRH2P25021 359 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 CORO1AP31146 461 aaKnown RBP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 RPS6KA3P51812 740 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 IL2P60568 153 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 MERTKQ12866 999 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 BNIP2Q12982 314 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 PABPC1LQ4VXU2 614 aaKnown RBP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 DNAJC14Q6Y2X3 702 aaPredicted RBP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 GPRIN3Q6ZVF9 776 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 TMEM199Q8N511 208 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 CENPNQ96H22 339 aaPredicted RBP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 C1QTNF3Q9BXJ4 246 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 ACTL8Q9H568 366 aa13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 CLK4Q9HAZ1 481 aaKnown RBP13.27□□□□□ -0.29
TUBA1B-201ENST00000332858 ZNF840PA6NDX5 716 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 STX7O15400 261 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 EEDO75530 441 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 TRMUO75648 421 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 STC2O76061 302 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 PYGLP06737 847 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CNPP09543 421 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 ALPIP09923 528 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CDK4P11802 303 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 MZF1P28698 734 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 SLC11A2P49281 568 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 DGKQP52824 942 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 ATXN7L2Q5T6C5 722 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 INTS11Q5TA45 600 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CXorf57Q6NSI4 855 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 BORAQ6PGQ7 559 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 TTC30BQ8N4P2 665 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 MFSD2AQ8NA29 543 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 OR6K2Q8NGY2 324 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CYGBQ8WWM9 190 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 PPM1MQ96MI6 270 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 GLT1D1Q96MS3 346 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 TRIM54Q9BYV2 358 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 BRINP2Q9C0B6 783 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 C2orf78A6NCI8 922 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CAPN1P07384 714 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 G6PDP11413 515 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CLCN7P51798 805 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 TWF1Q12792 350 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 ZNF177Q13360 481 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 ATP6AP1Q15904 470 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 SPATA19Q7Z5L4 167 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 RNF180Q86T96 592 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 FBXO22Q8NEZ5 403 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 OR56A4Q8NGH8 313 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 BOCQ9BWV1 1114 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 SMPD4Q9NXE4 827 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 E5RI56 91 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 TMX2-CTNND1H3BSU7 103 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 TMCC1O94876 653 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 GALTP07902 379 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 OR1D2P34982 312 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 PIK3CGP48736 1102 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 MTPNP58546 118 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 ERVK-8P63133 956 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 SLC36A3Q495N2 470 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 IRAK1BP1Q5VVH5 260 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 CHST15Q7LFX5 561 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 BIRC7Q96CA5 298 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 HAUS8Q9BT25 410 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 RSL24D1Q9UHA3 163 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 FCF1Q9Y324 198 aaKnown RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 PCDHB7Q9Y5E2 793 aa13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 MAGED1Q9Y5V3 778 aaPredicted RBP13.26□□□□□ -0.29
TUBA1B-201ENST00000332858 PRRC2BQ5JSZ5 2229 aaKnown RBP13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 K7ERQ8 282 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 VPS4BO75351 444 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 CLDN11O75508 207 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 SEC24AO95486 1093 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 TTPAP49638 278 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 CLCN2P51788 898 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 RFTN2Q52LD8 501 aaPredicted RBP13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 IL27RAQ6UWB1 636 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 PTRH1Q86Y79 214 aaKnown RBP13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 CLDN19Q8N6F1 224 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 METTL6Q8TCB7 284 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 MAGEE2Q8TD90 523 aaPredicted RBP13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
TUBA1B-201ENST00000332858 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms