RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 ZFHX2Q9C0A1 2572 aaPredicted RBP15.82■□□□□ 0.12
LRRC28-202ENST00000331450 WDR87Q6ZQQ6 2873 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 OR2AG2A6NM03 316 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 KMOO15229 486 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 OR1I1O60431 355 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 AP2A2O94973 939 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 S1PR4O95977 384 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 FAM153BP0C7A2 387 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 CD59P13987 128 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 CTSEP14091 401 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 RPS3P23396 243 aaKnown RBP eCLIP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 PPARGP37231 505 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 CTBSQ01459 385 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 ELOCQ15369 112 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 ERCC6LQ2NKX8 1250 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 FAM153CQ494X1 144 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 ZNF658BQ4V348 819 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 RNF187Q5TA31 235 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 STPG1Q5TH74 334 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 ZNF449Q6P9G9 518 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 TMEM220Q6QAJ8 160 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 XKR5Q6UX68 686 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 CYS1Q717R9 158 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 DET1Q7L5Y6 550 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 SDCCAG8Q86SQ7 713 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 TRAPPC5Q8IUR0 188 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 PALM2Q8IXS6 379 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 GSPT2Q8IYD1 628 aaKnown RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 KIAA2013Q8IYS2 634 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 SDR16C5Q8N3Y7 309 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 OTUD6BQ8N6M0 293 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 C2CD4AQ8NCU7 369 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 KNL1Q8NG31 2342 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 UBXN4Q92575 508 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 FAM122AQ96E09 287 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 SGF29Q96ES7 293 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 LINC00615Q96LM1 132 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 TIMM29Q9BSF4 260 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 CDC42EP4Q9H3Q1 356 aaKnown RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 INTS10Q9NVR2 710 aaKnown RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 NINJ2Q9NZG7 142 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 GULP1Q9UBP9 304 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 FBXO5Q9UKT4 447 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 PLEKHM1Q9Y4G2 1056 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 PRSS21Q9Y6M0 314 aa15.81■□□□□ 0.12
LRRC28-202ENST00000331450 V9GYY5 206 aaPredicted RBP15.81■□□□□ 0.12
LRRC28-202ENST00000331450 TCRBV9S1A1TA0A576 114 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 C4orf47A7E2U8 309 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 LMO7DNF2Z398 122 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 PRMT5O14744 637 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 NDUFS3O75489 264 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 SPAG6O75602 509 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ACP5P13686 325 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ZNF7P17097 686 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 CLCNKAP51800 687 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ADARP55265 1226 aaKnown RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 DMPKQ09013 629 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 MGAT5Q09328 741 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ILF3Q12906 894 aaKnown RBP eCLIP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 CTBP1Q13363 440 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 C1orf61Q13536 156 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ZNF789Q5FWF6 425 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 UBAP2Q5T6F2 1119 aaKnown RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 TEDDM1Q5T9Z0 273 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 WDR93Q6P2C0 686 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 CAPN12Q6ZSI9 719 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 KIAA0408Q6ZU52 694 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 CHST15Q7LFX5 561 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 GALNT7Q86SF2 657 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 BEND7Q8N7W2 519 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 LMX1AQ8TE12 382 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.8■□□□□ 0.122e-7■■■■■ 64.2
LRRC28-202ENST00000331450 TXLNGYQ9BZA5 131 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 SMYD2Q9NRG4 433 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 IARS2Q9NSE4 1012 aaKnown RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 SLC17A6Q9P2U8 582 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 SLC23A2Q9UGH3 650 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 GPSM3Q9Y4H4 160 aa15.8■□□□□ 0.12
LRRC28-202ENST00000331450 DNMT3AQ9Y6K1 912 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ARHGEF17Q96PE2 2063 aaPredicted RBP15.8■□□□□ 0.12
LRRC28-202ENST00000331450 ASCC3Q8N3C0 2202 aaKnown RBP15.79■□□□□ 0.12
LRRC28-202ENST00000331450 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.79■□□□□ 0.12
LRRC28-202ENST00000331450 FAM159BA6NKW6 160 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 QSOX1O00391 747 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 TPP1O14773 563 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 FLRT2O43155 660 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 F7P08709 466 aaPredicted RBP15.79■□□□□ 0.12
LRRC28-202ENST00000331450 AK4P27144 223 aaPredicted RBP15.79■□□□□ 0.12
LRRC28-202ENST00000331450 PMLP29590 882 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 LEPRP48357 1165 aaKnown RBP15.79■□□□□ 0.12
LRRC28-202ENST00000331450 VSNL1P62760 191 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 MPP1Q00013 466 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 SLMAPQ14BN4 828 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 TCEA2Q15560 299 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 KYNUQ16719 465 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 PLA2G4EQ3MJ16 856 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 CTSL3PQ5NE16 218 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 LVRNQ6Q4G3 990 aa15.79■□□□□ 0.12
LRRC28-202ENST00000331450 C3orf62Q6ZUJ4 267 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms