RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SPDYAQ5MJ70 313 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 ACBD5Q5T8D3 534 aaPredicted RBP15.72■□□□□ 0.11
PDGFB-201ENST00000331163 LPCAT4Q643R3 524 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 CRTC1Q6UUV9 634 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 DSG4Q86SJ6 1040 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 ARHGAP24Q8N264 748 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 EEF1AKMT1Q8WVE0 214 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 FOXJ1Q92949 421 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 GALPQ9UBC7 116 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 ARIH1Q9Y4X5 557 aaPredicted RBP15.72■□□□□ 0.11
PDGFB-201ENST00000331163 TIMM22Q9Y584 194 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 OR1A2Q9Y585 309 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 HIST1H2AGP0C0S8 130 aaPredicted RBP15.72■□□□□ 0.11
PDGFB-201ENST00000331163 HIST1H2ADP20671 130 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 KPNA2P52292 529 aaKnown RBP15.72■□□□□ 0.11
PDGFB-201ENST00000331163 TMED1Q13445 227 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 INSCQ1MX18 579 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 TPRG1Q6ZUI0 275 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 HIC2Q96JB3 615 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 HIST1H2AHQ96KK5 128 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 CDK15Q96Q40 435 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 NOTCH4Q99466 2003 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 HIST1H2AJQ99878 128 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 H2AFJQ9BTM1 129 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 PREBQ9HCU5 417 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 IL26Q9NPH9 171 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 MYO16Q9Y6X6 1858 aa15.72■□□□□ 0.11
PDGFB-201ENST00000331163 ARHGAP10A1A4S6 786 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 TRIM13O60858 407 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 PDE5AO76074 875 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 CD160O95971 181 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 CYP2A6P11509 494 aaPredicted RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 ATP6V1B1P15313 513 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 MPSTP25325 297 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 MAP4P27816 1152 aaKnown RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 RGS4P49798 205 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 DYNC1I2Q13409 638 aaKnown RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 AARS2Q5JTZ9 985 aaKnown RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 MBOAT1Q6ZNC8 495 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 CFAP206Q8IYR0 622 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 SIPA1Q96FS4 1042 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 CENPKQ9BS16 269 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 IL1RL2Q9HB29 575 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 PLAC1Q9HBJ0 212 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 GDE1Q9NZC3 331 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 APOBEC2Q9Y235 224 aaKnown RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 STON1Q9Y6Q2 735 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 PRNPP04156 253 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 LTA4HP09960 611 aaKnown RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 EPHA3P29320 983 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 POU4F1Q01851 419 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 GRSF1Q12849 480 aaKnown RBP eCLIP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 IER5LQ5T953 404 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 MYO1HQ8N1T3 1032 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 CEP70Q8NHQ1 597 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 DENND1AQ8TEH3 1009 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 PHF12Q96QT6 1004 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 ARL15Q9NXU5 204 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 APPL1Q9UKG1 709 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 GPSM3Q9Y4H4 160 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 REV3LO60673 3130 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 IGLON5A6NGN9 336 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 SLC7A4O43246 635 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 RECQL5O94762 991 aaPredicted RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 SERPINB5P36952 375 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 MAPK8P45983 427 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 NRG1Q02297 640 aaPredicted RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 LRRC8EQ6NSJ5 796 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 HSD11B1LQ7Z5J1 315 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 ST13P4Q8IZP2 240 aaPredicted RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 DRAXINQ8NBI3 349 aaPredicted RBP15.71■□□□□ 0.11
PDGFB-201ENST00000331163 TMEM159Q96B96 161 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 MID1IP1Q9NPA3 183 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 PPM1HQ9ULR3 514 aa15.71■□□□□ 0.11
PDGFB-201ENST00000331163 PLIN3O60664 434 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 ANPEPP15144 967 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 ITPKAP23677 461 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 MTHFRP42898 656 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 SCUBE1Q8IWY4 988 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 SYTL1Q8IYJ3 562 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 FBXO39Q8N4B4 442 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 RBM15BQ8NDT2 890 aaKnown RBP15.7■□□□□ 0.1
PDGFB-201ENST00000331163 RPLP0P6Q8NHW5 317 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 KCNK12Q9HB15 430 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 PDFQ9HBH1 243 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 GALNT8Q9NY28 637 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 PDP2Q9P2J9 529 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 PDCD11Q14690 1871 aaKnown RBP15.7■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF189O75820 626 aaPredicted RBP15.7■□□□□ 0.1
PDGFB-201ENST00000331163 HOXB8P17481 243 aaPredicted RBP15.7■□□□□ 0.1
PDGFB-201ENST00000331163 ARNTP27540 789 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 ADRA1AP35348 466 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 CNTN1Q12860 1018 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 SMYD5Q6GMV2 418 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 TMEM220Q6QAJ8 160 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 CPXM2Q8N436 756 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 CEP295NLQ96MC4 621 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 AASDHPPTQ9NRN7 309 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 ZNF212Q9UDV6 495 aa15.7■□□□□ 0.1
PDGFB-201ENST00000331163 LNPEPQ9UIQ6 1025 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms