RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 SYCE2Q6PIF2 218 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 TXNDC11Q6PKC3 985 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 ZBTB2Q8N680 514 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 HCAR2Q8TDS4 363 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 AGAP11Q8TF27 550 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 LRIG1Q96JA1 1093 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 ZBTB26Q9HCK0 441 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 OBP2AQ9NY56 170 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 PKD2L2Q9NZM6 624 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 CD274Q9NZQ7 290 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 DEC1Q9P2X7 70 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 MSRAQ9UJ68 235 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 PCTPQ9UKL6 214 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 SARDHQ9UL12 918 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 ASB1Q9Y576 335 aa16.74■□□□□ 0.27
DDX41-201ENST00000330503 COPG1Q9Y678 874 aaKnown RBP16.74■□□□□ 0.27
DDX41-201ENST00000330503 RAP1GDS1P52306 607 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 ST8SIA6P61647 398 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 RALGDSQ12967 914 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 PPP1R3AQ16821 1122 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 SCAMP4Q969E2 229 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 ESAMQ96AP7 390 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 C3orf30Q96M34 536 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 COPS8Q99627 209 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 SEMA4BQ9NPR2 832 aaPredicted RBP16.73■□□□□ 0.27
DDX41-201ENST00000330503 UTP6Q9NYH9 597 aaKnown RBP16.73■□□□□ 0.27
DDX41-201ENST00000330503 TMCO1Q9UM00 188 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 DNAJC15Q9Y5T4 150 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 AZIN1O14977 448 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 SLC22A2O15244 555 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 ADSLP30566 484 aaPredicted RBP16.73■□□□□ 0.27
DDX41-201ENST00000330503 MXRA7P84157 204 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 LCP2Q13094 533 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 DNAL1Q4LDG9 190 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 KANK2Q63ZY3 851 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 VITQ6UXI7 678 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 TMEM184AQ6ZMB5 413 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 Q6ZVL8 140 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 ULK4Q96C45 1275 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 CLPTM1LQ96KA5 538 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 KCNA7Q96RP8 456 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 THTPAQ9BU02 230 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 PLA2G2FQ9BZM2 168 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 FAM83DQ9H4H8 585 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 SPATS2LQ9NUQ6 558 aaKnown RBP16.73■□□□□ 0.27
DDX41-201ENST00000330503 NUDT4Q9NZJ9 180 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 ZNF225Q9UK10 706 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 ADAMTS6Q9UKP5 1117 aa16.73■□□□□ 0.27
DDX41-201ENST00000330503 PIKFYVEQ9Y2I7 2098 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 RGSL1A5PLK6 1076 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 SNX2O60749 519 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 TM7SF2O76062 418 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 HLA-EP13747 358 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 DGKAP23743 735 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 PRDX3P30048 256 aaKnown RBP16.72■□□□□ 0.27
DDX41-201ENST00000330503 ETV3P41162 512 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 HYAL1Q12794 435 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 PDGFRLQ15198 375 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 C18orf21Q32NC0 220 aaPredicted RBP16.72■□□□□ 0.27
DDX41-201ENST00000330503 C9orf64Q5T6V5 341 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 LARP4Q71RC2 724 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX41-201ENST00000330503 DPPA4Q7L190 304 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 MAGEC3Q8TD91 643 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 MRPL38Q96DV4 380 aaKnown RBP16.72■□□□□ 0.27
DDX41-201ENST00000330503 SPATA16Q9BXB7 569 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 CD248Q9HCU0 757 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 CEP290O15078 2479 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 ANKRD12Q6UB98 2062 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 A0A088AWK7 358 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 PEX11AO75192 247 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 ENTPD5O75356 428 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 THRAP10827 490 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 ITGAXP20702 1163 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 RGS4P49798 205 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 METAP1P53582 386 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 PARS2Q7L3T8 475 aaKnown RBP16.72■□□□□ 0.27
DDX41-201ENST00000330503 TECPR1Q7Z6L1 1165 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 ADAMTSL2Q86TH1 951 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 WDR60Q8WVS4 1066 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 DLG3Q92796 817 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 RTKNQ9BST9 563 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 TUBB1Q9H4B7 451 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 SLC28A3Q9HAS3 691 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 THG1LQ9NWX6 298 aaKnown RBP16.72■□□□□ 0.27
DDX41-201ENST00000330503 EIF2B4Q9UI10 523 aaKnown RBP16.72■□□□□ 0.27
DDX41-201ENST00000330503 CDH7Q9ULB5 785 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 PTGDR2Q9Y5Y4 395 aa16.72■□□□□ 0.27
DDX41-201ENST00000330503 ANTXRLA6NF34 631 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 E2F3O00716 465 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 CCR7P32248 378 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 RAB30Q15771 203 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 FNDC3BQ53EP0 1204 aaKnown RBP16.71■□□□□ 0.27
DDX41-201ENST00000330503 ANKRD54Q6NXT1 300 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 SYVN1Q86TM6 617 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 SNX32Q86XE0 403 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 SCUBE1Q8IWY4 988 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 MYO1HQ8N1T3 1032 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 C19orf60Q96EN9 201 aa16.71■□□□□ 0.27
DDX41-201ENST00000330503 HGH1Q9BTY7 390 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms