RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 HTRA3P83110 453 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 EMX1Q04741 257 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF273Q14593 569 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CTU2Q2VPK5 515 aaKnown RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 DARS2Q6PI48 645 aaKnown RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 OR8H3Q8N146 312 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 YIPF7Q8N8F6 280 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 ZMIZ2Q8NF64 920 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 PCNPQ8WW12 178 aaKnown RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 LGALS12Q96DT0 336 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 RPL10LQ96L21 214 aaKnown RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 NODALQ96S42 347 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 SPOCK3Q9BQ16 436 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 KIFC3Q9BVG8 833 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 BCL2L14Q9BZR8 327 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 MMP28Q9H239 520 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CATSPERBQ9H7T0 1116 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CYP3A43Q9HB55 503 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CACNA2D2Q9NY47 1150 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 DCDC2Q9UHG0 476 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 HACL1Q9UJ83 578 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 PRELID3BQ9Y3B1 194 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 GMPPBQ9Y5P6 360 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 STYXL1Q9Y6J8 313 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 A0A0U1RQS6 177 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 METTL15A6NJ78 407 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 H0YAE9 185 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 SLC22A5O76082 557 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 GZMKP49863 264 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 JAK3P52333 1124 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 SLC7A2P52569 658 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 ERVFC1P60507 584 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 ERVK-8P63133 956 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 SPP2Q13103 211 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 TRAF3Q13114 568 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 TNK1Q13470 666 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 TFDP2Q14188 446 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 FBXO43Q4G163 708 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 XKR9Q5GH70 373 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 C6orf141Q5SZD1 244 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 REP15Q6BDI9 236 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 ARFGAP1Q8N6T3 406 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 DNAJC5GQ8N7S2 189 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 KIAA1958Q8N8K9 716 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CHDHQ8NE62 594 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 OR10T2Q8NGX3 314 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 TRMT61AQ96FX7 289 aaKnown RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 SLC45A3Q96JT2 553 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 KLHL15Q96M94 604 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 SDCBP2Q9H190 292 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 MMP27Q9H306 513 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CD93Q9NPY3 652 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 RBAKQ9NYW8 714 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-201ENST00000328923 COL20A1Q9P218 1284 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 EGFL7Q9UHF1 273 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 STOML2Q9UJZ1 356 aa11.74□□□□□ -0.53
SHMT2-201ENST00000328923 CCDC78A2IDD5 438 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 RAB19A4D1S5 217 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 HACD1B0YJ81 288 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 F8W036 122 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SMLR1H3BR10 107 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 BTN3A3O00478 584 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 TLL1O43897 1013 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 PSMA4P25789 261 aaKnown RBP11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SOX11P35716 441 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 RFX2P48378 723 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 MAP2K6P52564 334 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF45Q02386 682 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SMTNL2Q2TAL5 461 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SEL1L3Q68CR1 1132 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 RETSATQ6NUM9 610 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 BEND5Q7L4P6 421 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 ZBTB33Q86T24 672 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 KCTD6Q8NC69 237 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SYTL5Q8TDW5 730 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-201ENST00000328923 DEPDC1BQ8WUY9 529 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 LPAR1Q92633 364 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 PHF21AQ96BD5 680 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 FAM149B1Q96BN6 582 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SDHCQ99643 169 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-201ENST00000328923 DCSTAMPQ9H295 470 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 OR51B5Q9H339 312 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 ZBTB20Q9HC78 741 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-201ENST00000328923 UBIAD1Q9Y5Z9 338 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 ZNF541Q9H0D2 1346 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SIP14410 1827 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 ST8SIA5O15466 376 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 MAFO75444 373 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-201ENST00000328923 ENDOD1O94919 500 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 FCER2P06734 321 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 NR3C2P08235 984 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 CCNYL3P0C7X3 344 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 PTX3P26022 381 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-201ENST00000328923 SFNP31947 248 aa11.73□□□□□ -0.53
SHMT2-201ENST00000328923 RGS7P49802 495 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms