RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 SDCCAG3Q96C92 435 aa16.57■□□□□ 0.24
SSH1-201ENST00000326470 MBOAT4Q96T53 435 aa16.57■□□□□ 0.24
SSH1-201ENST00000326470 HEPHQ9BQS7 1158 aa16.57■□□□□ 0.24
SSH1-201ENST00000326470 C1QTNF3Q9BXJ4 246 aa16.57■□□□□ 0.24
SSH1-201ENST00000326470 COMMD8Q9NX08 183 aa16.57■□□□□ 0.24
SSH1-201ENST00000326470 MEIS3P2A8K0S8 358 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 ECI2O75521 394 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 GGT1P19440 569 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 ITIH1P19827 911 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 HPCAL1P37235 193 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 MLLT6P55198 1093 aaPredicted RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 TPD52P55327 224 aaPredicted RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 SULT1C3Q6IMI6 304 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 SCIMPQ6UWF3 145 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 PIWIL3Q7Z3Z3 882 aaKnown RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 ZNF467Q7Z7K2 595 aaPredicted RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 MINDY2Q8NBR6 621 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 ZNF555Q8NEP9 628 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 PJA1Q8NG27 643 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 HMCESQ96FZ2 354 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 VMP1Q96GC9 406 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 OSBPL10Q9BXB5 764 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 DGCR6LQ9BY27 220 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 IKZF3Q9UKT9 509 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 LCHNA4D1U4 455 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 STX16O14662 325 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 MLYCDO95822 493 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 F2P00734 622 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 OGNP20774 298 aaKnown RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 NR4A1P22736 598 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 YWHAHQ04917 246 aaPredicted RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 TOP3AQ13472 1001 aaPredicted RBP16.56■□□□□ 0.24
SSH1-201ENST00000326470 SELPLGQ14242 412 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 PTPRCAPQ14761 206 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 CTF1Q16619 201 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 C6orf136Q5SQH8 315 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 PAQR3Q6TCH7 311 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 ARRDC2Q8TBH0 407 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 PPM1MQ96MI6 270 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 ACOX2Q99424 681 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 PSD2Q9BQI7 771 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 AMBRA1Q9C0C7 1298 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 SMURF2Q9HAU4 748 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 CATSPERZQ9NTU4 200 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.56■□□□□ 0.24
SSH1-201ENST00000326470 ARL5AQ9Y689 179 aa16.56■□□□□ 0.24
SSH1-201ENST00000326470 SYCE1LA8MT33 242 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 AQP9O43315 295 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 XYLBO75191 536 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 JRKO75564 520 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 RPP40O75818 363 aaKnown RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 HAPLN1P10915 354 aaPredicted RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 STC1P52823 247 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 CRYBB1P53674 252 aaPredicted RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 MTPNP58546 118 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 ADAM17P78536 824 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 PIGFQ07326 219 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 TSNQ15631 228 aaKnown RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 CTU2Q2VPK5 515 aaKnown RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 TEX26Q8N6G2 289 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 FNDC5Q8NAU1 212 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 GPRC5AQ8NFJ5 357 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 UGT2B28Q9BY64 529 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 LTB4R2Q9NPC1 389 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 USE1Q9NZ43 259 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 KIAA1522Q9P206 1035 aaPredicted RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 DNAJB9Q9UBS3 223 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 TMED5Q9Y3A6 229 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 NAALAD2Q9Y3Q0 740 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 SNX5Q9Y5X3 404 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 ST14Q9Y5Y6 855 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 ARNTLO00327 626 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 THP07101 528 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 PIGAP37287 484 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 PGFP49763 221 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 AFF1P51825 1210 aaKnown RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 PPP2R2BQ00005 443 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 CD47Q08722 323 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 SETMARQ53H47 684 aaPredicted RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 CCDC92Q53HC0 331 aaPredicted RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 PERM1Q5SV97 790 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 LAIR2Q6ISS4 152 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 TMEM53Q6P2H8 277 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 MOB2Q70IA6 237 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 FKBP9P1Q75LS8 142 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 AADATQ8N5Z0 425 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 OR4L1Q8NH43 312 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 S100ZQ8WXG8 99 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 FUBP1Q96AE4 644 aaKnown RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 C1orf74Q96LT6 269 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 CGREF1Q99674 301 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 ACBD6Q9BR61 282 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 HGH1Q9BTY7 390 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 SP110Q9HB58 689 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 TMLHEQ9NVH6 421 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 SMPD4Q9NXE4 827 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 MTRRQ9UBK8 725 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 PCTPQ9UKL6 214 aa16.55■□□□□ 0.24
SSH1-201ENST00000326470 GPC6Q9Y625 555 aaPredicted RBP16.55■□□□□ 0.24
SSH1-201ENST00000326470 TREHO43280 583 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms