RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 LHX5Q9H2C1 402 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ZDHHC7Q9NXF8 308 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 PCDH10Q9P2E7 1040 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 RNF6Q9Y252 685 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SH3D21A4FU49 640 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ERN1O75460 977 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 PGLSO95336 258 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 CYP3A4P08684 503 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NAT2P11245 290 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 IMPDH1P20839 514 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJB1P25685 340 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 S100A2P29034 98 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 STK11Q15831 433 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 AMHR2Q16671 573 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 MGAT5BQ3V5L5 792 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 HHIPL2Q6UWX4 724 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SLC34A3Q8N130 599 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SLC15A4Q8N697 577 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NRG4Q8WWG1 115 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 KCTD7Q96MP8 289 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ACP6Q9NPH0 428 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NMRK2Q9NPI5 230 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 NOBOXO60393 691 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ULK1O75385 1050 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 UGT2B17O75795 530 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SCELO95171 688 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 IL1BP01584 269 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 PRKAR2AP13861 404 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 GTF2BQ00403 316 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 MYBPC1Q00872 1141 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 IKBKEQ14164 716 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 BPHLQ86WA6 291 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 LZTR1Q8N653 840 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 SMG8Q8ND04 991 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 C9orf43Q8TAL5 461 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 UFD1Q92890 307 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 TEFMQ96QE5 360 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 SPATA5L1Q9BVQ7 753 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 MKRN2Q9H000 416 aaKnown RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 AP5M1Q9H0R1 490 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 RETREG1Q9H6L5 497 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 ZFP14Q9HCL3 533 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 STK32BQ9NY57 414 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 UPB1Q9UBR1 384 aa7□□□□□ -1.29
SMC1A-201ENST00000322213 POLR3HQ9Y535 204 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 NCOA6Q14686 2063 aaPredicted RBP7□□□□□ -1.29
SMC1A-201ENST00000322213 SERPINB7O75635 380 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DCKP27707 260 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 RAB2AP61019 212 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FAM91A1Q658Y4 838 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SHQ1Q6PI26 577 aaKnown RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ADAMTSL2Q86TH1 951 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF431Q8TF32 576 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 MAELQ96JY0 434 aaKnown RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SLC7A5P2Q9GIP4 190 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SETD4Q9NVD3 440 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 KLHL28Q9NXS3 571 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJB9Q9UBS3 223 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ZNHIT2Q9UHR6 403 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DAGLAQ9Y4D2 1042 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ARHGAP21Q5T5U3 1957 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 A0A1W2PPW3 197 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 KCNK1O00180 336 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CD72P21854 359 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 VARSP26640 1264 aaKnown RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 HERVK_113P63132 956 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PMS2P3Q13401 168 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 LHFPL3Q86UP9 236 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 MIPEPQ99797 713 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ERVK-6Q9BXR3 956 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 NARFQ9UHQ1 456 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 VPS51Q9UID3 782 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CMAHPQ9Y471 501 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SLC28A1O00337 649 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SNAP29O95721 258 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ATP6AP1Q15904 470 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FAM183BPQ6ZVS7 135 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 KRT77Q7Z794 578 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 TMEM199Q8N511 208 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 VGLL2Q8N8G2 317 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ZUFSPQ96AP4 578 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 TTYH2Q9BSA4 534 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ANKRD60Q9BZ19 345 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 AHSPQ9NZD4 102 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FARP1Q9Y4F1 1045 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ANKRD34BA5PLL1 514 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 E5RJQ4 531 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 M0R233 179 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 INHBCP55103 352 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DAG1Q14118 895 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ECM1Q16610 540 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 NFE2Q16621 373 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SH3PXD2AQ5TCZ1 1133 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SLC7A6OSQ96CW6 309 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 C1GALT1C1Q96EU7 318 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FBXL20Q96IG2 436 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF607Q96SK3 696 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PRDM8Q9NQV8 689 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms