RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 AQP4P55087 323 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 EMC10Q5UCC4 262 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 DPY19L3Q6ZPD9 716 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TMEM25Q86YD3 366 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 MMAAQ8IVH4 418 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 ZBTB2Q8N680 514 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PLD4Q96BZ4 506 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RTP4Q96DX8 246 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 SUV39H2Q9H5I1 410 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RREB1Q92766 1687 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 DHRS12A0PJE2 317 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RNASEH2AO75792 299 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RPL10P27635 214 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 MAPK9P45984 424 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TM4SF4P48230 202 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 IL5RAQ01344 420 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 FAM174BQ3ZCQ3 159 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 CCDC157Q569K6 752 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 ZCCHC8Q6NZY4 707 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PIANPQ8IYJ0 282 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PSKH2Q96QS6 385 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 YY1AP1Q9H869 796 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 EXOSC4Q9NPD3 245 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TDP1Q9NUW8 608 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PRKAG3Q9UGI9 489 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 COQ6Q9Y2Z9 468 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 AP4B1Q9Y6B7 739 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3DA0A087WVF3 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3IA0A087WXS9 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3EA0A087X179 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3KA0A087X1G2 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3FA6NER0 549 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3LB9A6J9 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PDLIM1O00151 329 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 MATN2O00339 956 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3HP0C7X1 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 CYP4B1P13584 511 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PTPN2P17706 415 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 ATP6V1C1P21283 382 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 VIPR2P41587 438 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 SLC18A1P54219 525 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 DAB2P98082 770 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 MTA1Q13330 715 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RIPK1Q13546 671 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 GTF2H2Q13888 395 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 SPIDRQ14159 915 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 PDK3Q15120 406 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 REP15Q6BDI9 236 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3GQ6DHY5 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3CQ6IPX1 549 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 GTF2H2CQ6P1K8 395 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 TBC1D3Q8IZP1 549 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RAB42Q8N4Z0 105 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 OR2AP1Q8NGE2 309 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 RMND5AQ9H871 391 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 THG1LQ9NWX6 298 aaKnown RBP10.88□□□□□ -0.67
TOP3A-201ENST00000321105 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
TOP3A-201ENST00000321105 CCDC189A1A4V9 331 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 MUSKO15146 869 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 ERAL1O75616 437 aaKnown RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 S1PR4O95977 384 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 CYP11A1P05108 521 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 FAM58BPP0C7Q3 252 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 ATF6P18850 670 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 HTR7P34969 479 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 DGKGP49619 791 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 CHIT1Q13231 466 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 DGCR6Q14129 220 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 RABL3Q5HYI8 236 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 CNKSR3Q6P9H4 555 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 P3H2Q8IVL5 708 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 CPSF7Q8N684 471 aaKnown RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 C2CD4AQ8NCU7 369 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 CXorf40AQ8TE69 158 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 SKA1Q96BD8 255 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 TRMOQ9BU70 441 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 RIOK2Q9BVS4 552 aaKnown RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 H3BM21 787 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 PLK4O00444 970 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 POP4O95707 220 aaKnown RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 FAM163BP0C2L3 166 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 EPORP19235 508 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 CD70P32970 193 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 MAGEA11P43364 429 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 MAPK8P45983 427 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 YAP1P46937 504 aaKnown RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 PREPP48147 710 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 GSCP56915 257 aaPredicted RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 PLEKHG6Q3KR16 790 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 FAM98BQ52LJ0 330 aaKnown RBP10.87□□□□□ -0.67
TOP3A-201ENST00000321105 WLSQ5T9L3 541 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 OFCC1Q8IZS5 231 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 OR10A6Q8NH74 314 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 ASB2Q96Q27 587 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 OR2AG1Q9H205 316 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 MRGBPQ9NV56 204 aa10.87□□□□□ -0.67
TOP3A-201ENST00000321105 LEF1Q9UJU2 399 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms