RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 VPS35Q96QK1 796 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 KIFC1Q9BW19 673 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 TRIM39Q9HCM9 518 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 TREX1Q9NSU2 369 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 SAMD15Q9P1V8 674 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 MARCH4Q9P2E8 410 aaPredicted RBP7.76□□□□□ -1.17
CDC42-201ENST00000315554 GULP1Q9UBP9 304 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 SLC23A2Q9UGH3 650 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 PCOLCE2Q9UKZ9 415 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 SOX13Q9UN79 622 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 GPR34Q9UPC5 381 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 DNAJC16Q9Y2G8 782 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 PCDHGB2Q9Y5G2 931 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 DGKBQ9Y6T7 804 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 LRP4O75096 1905 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 CABIN1Q9Y6J0 2220 aa7.76□□□□□ -1.17
CDC42-201ENST00000315554 ESPNB1AK53 854 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 B4DGG1 531 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 H7C0S8 307 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 AP3B1O00203 1094 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 TP73O15350 636 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 GRID2O43424 1007 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 OR1I1O60431 355 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 SNX2O60749 519 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CBFA2T3O75081 653 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 MLNP12872 115 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ACRV1P26436 265 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ACTR1BP42025 376 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 GRK6P43250 576 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 MAGEA3P43357 314 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ID4P47928 161 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 GYS2P54840 703 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 PLTPP55058 493 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ACTR1AP61163 376 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 GUCY2DQ02846 1103 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ACVR1Q04771 509 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ILF3Q12906 894 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDC42-201ENST00000315554 LAMB3Q13751 1172 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 GTF2H3Q13889 308 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 MORF4L2Q15014 288 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 LDLRAP1Q5SW96 308 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 TMEM220Q6QAJ8 160 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 AFTPHQ6ULP2 937 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 DBX2Q6ZNG2 339 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 HOOK3Q86VS8 718 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ZNF547Q8IVP9 402 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 UNC5BQ8IZJ1 945 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 FSTL5Q8N475 847 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 MMGT1Q8N4V1 131 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 KYQ8NBH2 561 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 MNS1Q8NEH6 495 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 FAM46DQ8NEK8 389 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 DDHD1Q8NEL9 900 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 OR4L1Q8NH43 312 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 OR4C6Q8NH72 309 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 PATE1Q8WXA2 126 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 STAMBPL1Q96FJ0 436 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CFAP36Q96G28 342 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 DCUN1D1Q96GG9 259 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 SCARF2Q96GP6 870 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 CNDP2Q96KP4 475 aaKnown RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 COPS8Q99627 209 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 WDR83Q9BRX9 315 aaKnown RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 RTKNQ9BST9 563 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 OSGEPL1Q9H4B0 414 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 NPDC1Q9NQX5 325 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 KLC4Q9NSK0 619 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 SPATS2LQ9NUQ6 558 aaKnown RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 SMOXQ9NWM0 555 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CUEDC1Q9NWM3 386 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 DLL3Q9NYJ7 618 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 GRHL1Q9NZI5 618 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 VPS18Q9P253 973 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 FTSJ1Q9UET6 329 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CHMP2BQ9UQN3 213 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 UTP11Q9Y3A2 253 aaKnown RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 PRSS21Q9Y6M0 314 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 TRBV5-4A0A0C4DH59 114 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CPED1A4D0V7 1026 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 NEMP2A6NFY4 417 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 LMO7DNF2Z398 122 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CHUKO15111 745 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CASC3O15234 703 aaKnown RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 VEGFDO43915 354 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 KCNK5O95279 499 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 LDOC1O95751 146 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 EML2O95834 649 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ALPPL2P10696 532 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ZNF7P17097 686 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 ITGB6P18564 788 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 PSMA3P25788 255 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ARNTP27540 789 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ELK3P41970 407 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 ARL4CP56559 192 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 CLDN6P56747 220 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 SIM1P81133 766 aaPredicted RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 DAB2P98082 770 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 PDIA2Q13087 525 aaKnown RBP7.75□□□□□ -1.17
CDC42-201ENST00000315554 CALCOCO2Q13137 446 aa7.75□□□□□ -1.17
CDC42-201ENST00000315554 TUBB2AQ13885 445 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms