RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GRIN2DO15399 1336 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TCRBV9S1A1TA0A576 114 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 CPSF6Q16630 551 aaKnown RBP eCLIP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 DENND1CQ8IV53 801 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 DERAQ9Y315 318 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 MED31Q9Y3C7 131 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TBL1XO60907 577 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TPSB2P20231 275 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TOB1P50616 345 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TPSAB1Q15661 275 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 PRAMEF17Q5VTA0 474 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 UNC5BQ8IZJ1 945 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 C1orf216Q8TAB5 229 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TAPBPLQ9BX59 468 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 GBA2Q9HCG7 927 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 KNL1Q8NG31 2342 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 PIK3C2BO00750 1634 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 ROBO3Q96MS0 1386 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 CAPN14A8MX76 684 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 GRM6O15303 877 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 EPCAMP16422 314 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 GRK5P34947 590 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 SF1Q15637 639 aaKnown RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 TNS4Q8IZW8 715 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 KAT2AQ92830 837 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 RGS17Q9UGC6 210 aaPredicted RBP15.35■□□□□ 0.05
HCFC1-201ENST00000310441 CDH22Q9UJ99 828 aa15.35■□□□□ 0.05
HCFC1-201ENST00000310441 AUHQ13825 339 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 USP30Q70CQ3 517 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 NKIRAS2Q9NYR9 191 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 DCLK1O15075 740 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 SCGB2A1O75556 95 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 RENP00797 406 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF823P16415 610 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 GRK6P43250 576 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 MFSD5Q6N075 450 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 CEP76Q8TAP6 659 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 TRPM4Q8TD43 1214 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 PIH1D1Q9NWS0 290 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 MAP1BP46821 2468 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 PRORSD1PA6NEY8 169 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 GRSF1Q12849 480 aaKnown RBP eCLIP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 SWT1Q5T5J6 900 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 FAM183BPQ6ZVS7 135 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 RIOX2Q8IUF8 465 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 CMTR2Q8IYT2 770 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF558Q96NG5 402 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 TCF25Q9BQ70 676 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 ABCG4Q9H172 646 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 PHF24Q9UPV7 400 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 NME6O75414 186 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 BPNT1O95861 308 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 SLC35G6P0C7Q6 338 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 PRKD1Q15139 912 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 BBS12Q6ZW61 710 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 C1orf186Q6ZWK4 172 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 PGLYRP2Q96PD5 576 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 TXNL4AP83876 142 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 ACVR2BQ13705 512 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 DCLRE1AQ6PJP8 1040 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 EPS8L1Q8TE68 723 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 MFSD14AQ96MC6 490 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 NDNQ99608 321 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 DHX15O43143 795 aaKnown RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 STK16O75716 305 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 CLCN7P51798 805 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 IST1P53990 364 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 SLC25A52Q3SY17 297 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 UBE2R2Q712K3 238 aaPredicted RBP15.34■□□□□ 0.05
HCFC1-201ENST00000310441 GRHL1Q9NZI5 618 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 ITGA10O75578 1167 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 KCNJ2P63252 427 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 CACNG1Q06432 222 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 C16orf59Q7L2K0 433 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 MCMBPQ9BTE3 642 aa15.34■□□□□ 0.05
HCFC1-201ENST00000310441 ZNF155Q12901 538 aaPredicted RBP15.33■□□□□ 0.05
HCFC1-201ENST00000310441 SPATS1Q496A3 300 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 CRY2Q49AN0 593 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 NAT14Q8WUY8 206 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 NELFAQ9H3P2 528 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 H3BM21 787 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 PSKH1P11801 424 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 HDCP19113 662 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 CMPK1P30085 196 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 HSD17B2P37059 387 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 ADAM17P78536 824 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 ITGA7Q13683 1181 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 SLC30A6Q6NXT4 461 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 TMPRSS11BQ86T26 416 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 RAVER1Q8IY67 606 aaKnown RBP15.33■□□□□ 0.05
HCFC1-201ENST00000310441 ZBED6CLQ96FA7 236 aaPredicted RBP15.33■□□□□ 0.05
HCFC1-201ENST00000310441 MYO19Q96H55 970 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 MAU2Q9Y6X3 613 aa15.33■□□□□ 0.05
HCFC1-201ENST00000310441 PTPRUQ92729 1446 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 OR2AJ1Q8NGZ0 328 aa15.33■□□□□ 0.04
HCFC1-201ENST00000310441 C9orf43Q8TAL5 461 aaPredicted RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 RBM18Q96H35 190 aaKnown RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 KCTD15Q96SI1 283 aaPredicted RBP15.33■□□□□ 0.04
HCFC1-201ENST00000310441 ZNF282Q9UDV7 671 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms