RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 THRAP10827 490 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 XPAP23025 273 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-201ENST00000309469 FCARP24071 287 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 RAB30Q15771 203 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 ACSBG2Q5FVE4 666 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 TANGO2Q6ICL3 276 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 MYO1HQ8N1T3 1032 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 PELI3Q8N2H9 469 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 ZNF483Q8TF39 744 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-201ENST00000309469 ABCG8Q9H221 673 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 FAM83DQ9H4H8 585 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 TMPRSS11EQ9UL52 423 aa20.99■□□□□ 0.95
ATG4D-201ENST00000309469 IGLV3-16A0A075B6K0 115 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 RGSL1A5PLK6 1076 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 C16orf96A6NNT2 1141 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 RFXAPO00287 272 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 AZIN1O14977 448 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 RAP1GDS1P52306 607 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 SLC25A3Q00325 362 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 B4GALNT1Q00973 533 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 SBSNQ6UWP8 590 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 CHSY3Q70JA7 882 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 FRA10AC1Q70Z53 315 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 PPP2R3CQ969Q6 453 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 MARK4Q96L34 752 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 SPATA16Q9BXB7 569 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 SEMA4BQ9NPR2 832 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-201ENST00000309469 HPS4Q9NQG7 708 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 UTP6Q9NYH9 597 aaKnown RBP20.98■□□□□ 0.95
ATG4D-201ENST00000309469 PCTPQ9UKL6 214 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 COPG1Q9Y678 874 aaKnown RBP20.98■□□□□ 0.95
ATG4D-201ENST00000309469 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.98■□□□□ 0.95
ATG4D-201ENST00000309469 ATG2AQ2TAZ0 1938 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 TM7SF2O76062 418 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 CRY1Q16526 586 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 POM121L1PQ3SYA9 428 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 FAM219BQ5XKK7 198 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 KANK2Q63ZY3 851 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 CYHR1Q6ZMK1 362 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 DPPA4Q7L190 304 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 MRPL38Q96DV4 380 aaKnown RBP20.98■□□□□ 0.95
ATG4D-201ENST00000309469 PANX3Q96QZ0 392 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 THTPAQ9BU02 230 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 DNAJC15Q9Y5T4 150 aa20.98■□□□□ 0.95
ATG4D-201ENST00000309469 CD1EP15812 388 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 DCDC1P59894 354 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 EIF4HQ15056 248 aaKnown RBP20.97■□□□□ 0.95
ATG4D-201ENST00000309469 TTLL9Q3SXZ7 439 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 FNDC3BQ53EP0 1204 aaKnown RBP20.97■□□□□ 0.95
ATG4D-201ENST00000309469 TMEM184AQ6ZMB5 413 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 Q6ZVL8 140 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 SCUBE1Q8IWY4 988 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 RP9Q8TA86 221 aaKnown RBP20.97■□□□□ 0.95
ATG4D-201ENST00000309469 DTX3LQ8TDB6 740 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 C19orf60Q96EN9 201 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 RTKNQ9BST9 563 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 ZBTB26Q9HCK0 441 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 ZFP14Q9HCL3 533 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 RAD18Q9NS91 495 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 KLHL42Q9P2K6 505 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 CDH7Q9ULB5 785 aa20.97■□□□□ 0.95
ATG4D-201ENST00000309469 MLYCDO95822 493 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 EZRP15311 586 aaKnown RBP20.96■□□□□ 0.95
ATG4D-201ENST00000309469 GM2AP17900 193 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 FOXA1P55317 472 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 RALGDSQ12967 914 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 CUL3Q13618 768 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 PPP1R3AQ16821 1122 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 SYCE2Q6PIF2 218 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 VITQ6UXI7 678 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 SCAMP4Q969E2 229 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 ESAMQ96AP7 390 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 HGH1Q9BTY7 390 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 FAM126AQ9BYI3 521 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-201ENST00000309469 SMOXQ9NWM0 555 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 KCTD5Q9NXV2 234 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 C2orf16Q68DN1 1984 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 A0A1B0GTL3 188 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 RAD51BO15315 384 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 LINC01565O15544 149 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 PRNPP04156 253 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 OR56A5P0C7T3 313 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 ETV3P41162 512 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 HERC3Q15034 1050 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 E2F5Q15329 346 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 HNRNPA1L2Q32P51 320 aaKnown RBP20.96■□□□□ 0.95
ATG4D-201ENST00000309469 LARP4Q71RC2 724 aaKnown RBP eCLIP20.96■□□□□ 0.951e-7■■■■■ 27.6
ATG4D-201ENST00000309469 PARS2Q7L3T8 475 aaKnown RBP20.96■□□□□ 0.95
ATG4D-201ENST00000309469 SNX32Q86XE0 403 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 TWIST2Q8WVJ9 160 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 FAM161BQ96MY7 647 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 KCNA7Q96RP8 456 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 MRGBPQ9NV56 204 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 EIF2B4Q9UI10 523 aaKnown RBP20.96■□□□□ 0.95
ATG4D-201ENST00000309469 SARDHQ9UL12 918 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 L3MBTL1Q9Y468 752 aa20.96■□□□□ 0.95
ATG4D-201ENST00000309469 KPNA3O00505 521 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-201ENST00000309469 E2F3O00716 465 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 UBDO15205 165 aa20.95■□□□□ 0.94
ATG4D-201ENST00000309469 FFAR2O15552 330 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms