RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 KHDC1Q4VXA5 237 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 PRAMEF14Q5SWL7 426 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 ZNF470Q6ECI4 717 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 TMEM220Q6QAJ8 160 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 AMZ2Q86W34 360 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 ANKMY2Q8IV38 441 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 BEND7Q8N7W2 519 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 RASGEF1AQ8N9B8 481 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 AVL9Q8NBF6 648 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 OR4C6Q8NH72 309 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 PWWP2AQ96N64 755 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 TMEM168Q9H0V1 697 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 RXFP3Q9NSD7 469 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 GNPTGQ9UJJ9 305 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 CDV3Q9UKY7 258 aaKnown RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 PNMA8BQ9ULN7 279 aaPredicted RBP17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 COMMD10Q9Y6G5 202 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 KNL1Q8NG31 2342 aa17.65■□□□□ 0.42
SSSCA1-201ENST00000309328 C17orf113A0A1B0GUU1 675 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 ESR1P03372 595 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 STX2P32856 288 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 PHBP35232 272 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 CARSP49589 748 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 CDKN1CP49918 316 aaPredicted RBP17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 B4GALNT1Q00973 533 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 MGAT5Q09328 741 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 INSCQ1MX18 579 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 UAP1L1Q3KQV9 507 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 ZCCHC8Q6NZY4 707 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 TAF8Q7Z7C8 310 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 IGDCC3Q8IVU1 814 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 CNPY4Q8N129 248 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 FAM181AQ8N9Y4 354 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 PANX3Q96QZ0 392 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 CDC6Q99741 560 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 SLC32A1Q9H598 525 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 ARFGAP3Q9NP61 516 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 MOCS1Q9NZB8 636 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 ZFATQ9P243 1243 aa17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 CORO1CQ9ULV4 474 aaPredicted RBP17.64■□□□□ 0.41
SSSCA1-201ENST00000309328 MGAT4DA6NG13 374 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 OR5K4A6NMS3 321 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 SLC30A4O14863 429 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 KPNA5O15131 536 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 SDC3O75056 442 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 FUCA1P04066 466 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 ECHS1P30084 290 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 RPIAP49247 311 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 IL9RQ01113 521 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 CTBSQ01459 385 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 BNIP3Q12983 259 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 NAB1Q13506 487 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 FASTKD3Q14CZ7 662 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 HSP90AA5PQ58FG0 334 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 C3orf62Q6ZUJ4 267 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 CHST15Q7LFX5 561 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 SLC26A11Q86WA9 606 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 ZNF547Q8IVP9 402 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 NAXDQ8IW45 347 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 SLC25A45Q8N413 288 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 C2CD4AQ8NCU7 369 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 LRRN4CLQ8ND94 238 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 OR6C4Q8NGE1 309 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 OR2I1PQ8NGU4 316 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 OR2L2Q8NH16 312 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 SGF29Q96ES7 293 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 WDR83Q9BRX9 315 aaKnown RBP17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 CCM2Q9BSQ5 444 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 CCDC68Q9H2F9 335 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 TCEAL2Q9H3H9 227 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 MARCH4Q9P2E8 410 aaPredicted RBP17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 FBXO5Q9UKT4 447 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 ACSL5Q9ULC5 683 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 NFU1Q9UMS0 254 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 RALGAPA1Q6GYQ0 2036 aa17.63■□□□□ 0.41
SSSCA1-201ENST00000309328 OR2AG2A6NM03 316 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 GDF9O60383 454 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 ACP5P13686 325 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 CD59P13987 128 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 ACTR1BP42025 376 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 LEPRP48357 1165 aaKnown RBP17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 DUSP3P51452 185 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 CTSCP53634 463 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 ACTR1AP61163 376 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 RPA4Q13156 261 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 HP1BP3Q5SSJ5 553 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 C6orf132Q5T0Z8 1188 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 ZNF648Q5T619 568 aaPredicted RBP17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 CRTC3Q6UUV7 619 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 WASH2PQ6VEQ5 465 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 HM13Q8TCT9 377 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 LPGAT1Q92604 370 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 TRIM56Q9BRZ2 755 aaKnown RBP17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 BOCQ9BWV1 1114 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 WASH6PQ9NQA3 447 aa17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 IARS2Q9NSE4 1012 aaKnown RBP17.62■□□□□ 0.41
SSSCA1-201ENST00000309328 GOLGA8KD6RF30 607 aa17.61■□□□□ 0.41
SSSCA1-201ENST00000309328 GOLGA8TH3BQL2 631 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms