RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GRAMD1CQ8IYS0 662 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CPA5Q8WXQ8 436 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZNF641Q96N77 438 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 GSDMCQ9BYG8 508 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ROBO1Q9Y6N7 1651 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 A0A1B0GVI7 797 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RGS10O43665 173 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CST1P01037 141 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CKMP06732 381 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CDC25AP30304 524 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GOLGA7BQ2TAP0 167 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 LRRC55Q6ZSA7 311 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TRMT1LQ7Z2T5 733 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZNF571Q7Z3V5 609 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 PACS2Q86VP3 889 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TRPV3Q8NET8 790 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 DQX1Q8TE96 717 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 SLC41A3Q96GZ6 507 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PANX1Q96RD7 426 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TRPV5Q9NQA5 729 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PRELID3BQ9Y3B1 194 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GRIP1Q9Y3R0 1128 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZMYND10O75800 440 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PTBP1P26599 531 aaKnown RBP eCLIP3.98□□□□□ -1.77
USH2A-201ENST00000307340 MZT1Q08AG7 82 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 NOMO1Q15155 1222 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZRANB3Q5FWF4 1079 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MRPS17Q9Y2R5 130 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 A3GALT2U3KPV4 340 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 LRP5O75197 1615 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 KCNK5O95279 499 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CASP7P55210 303 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SEMA5AQ13591 1074 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 BAATQ14032 418 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 CSHL1Q14406 222 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ARHGAP19Q14CB8 494 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 NOL9Q5SY16 702 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 CHST15Q7LFX5 561 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 ADAT2Q7Z6V5 191 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 EEF1AKMT1Q8WVE0 214 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TMEM106CQ9BVX2 250 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 HEMGNQ9BXL5 484 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 DNAJC18Q9H819 358 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MOCS1Q9NZB8 636 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 DOLKQ9UPQ8 538 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GRM6O15303 877 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 INPP4BO15327 924 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RPLP0P05388 317 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 PAX7P23759 505 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ARCN1P48444 511 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 IL10RBQ08334 325 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GRIK4Q16099 956 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RTL4Q6ZR62 310 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MON1BQ7L1V2 547 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PNLDC1Q8NA58 520 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZKSCAN4Q969J2 545 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 CDC6Q99741 560 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ACO2Q99798 780 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZCWPW1Q9H0M4 648 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 LMAN2LQ9H0V9 348 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 RC3H2Q9HBD1 1191 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZFYVE1Q9HBF4 777 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ETNK2Q9NVF9 386 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GALNT8Q9NY28 637 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 GPRC5DQ9NZD1 345 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 XKRYO14609 159 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TSPAN4O14817 238 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TPPPO94811 219 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TRUB2O95900 331 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 MT-ND2P03891 347 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 THEGLP0DJG4 465 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 FAM153CQ494X1 144 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZC2HC1CQ53FD0 456 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 LIPJQ5W064 366 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ARMCX6Q7L4S7 300 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TMCO2Q7Z6W1 182 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 XYLT1Q86Y38 959 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 BRD9Q9H8M2 597 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 CDC14AQ9UNH5 594 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 POFUT2Q9Y2G5 429 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 MAU2Q9Y6X3 613 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 DUSP11O75319 330 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 PVALBP20472 110 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 METAP1DQ6UB28 335 aaPredicted RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 TMPRSS11BQ86T26 416 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 SMG7Q92540 1137 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 TRPV2Q9Y5S1 764 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PSME4Q14997 1843 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 LCHNA4D1U4 455 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 TPD52L2O43399 206 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 KRT33AO76009 404 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 POP4O95707 220 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 MTTPP55157 894 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 INCA1Q0VD86 236 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 PAN2Q504Q3 1202 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 PLEKHH3Q7Z736 793 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 ZNF554Q86TJ5 538 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 C8orf48Q96LL4 319 aa3.98□□□□□ -1.77
USH2A-201ENST00000307340 QRSL1Q9H0R6 528 aaKnown RBP3.98□□□□□ -1.77
USH2A-201ENST00000307340 COL20A1Q9P218 1284 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms