RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 POLBP06746 335 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GP1BAP07359 652 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PRSS56P0CW18 603 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IDSP22304 550 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PMLP29590 882 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CA5AP35218 305 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NSG1P42857 185 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MAGEA3P43357 314 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TTPAP49638 278 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PRLHRP49683 370 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CDKN1CP49918 316 aaPredicted RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CLCNKAP51800 687 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CTSCP53634 463 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MRPS25P82663 173 aaKnown RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DHX9Q08211 1270 aaKnown RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FOXC1Q12948 553 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 THOC5Q13769 683 aaKnown RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SEPT7Q16181 437 aaKnown RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DBN1Q16643 649 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HIF1AQ16665 826 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 BBS9Q3SYG4 887 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 BCL7AQ4VC05 210 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DNTTIP2Q5QJE6 756 aaKnown RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 N4BP2L1Q5TBK1 243 aaPredicted RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KIAA0930Q6ICG6 404 aaPredicted RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MRNIPQ6NTE8 343 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HIBCHQ6NVY1 386 aaPredicted RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GUSBP11Q6P575 273 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZNF449Q6P9G9 518 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CES3Q6UWW8 571 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 AMZ2Q86W34 360 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TRIM48Q8IWZ4 208 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 AVL9Q8NBF6 648 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GPR156Q8NFN8 814 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 STAMBPL1Q96FJ0 436 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SGSM3Q96HU1 749 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ERP44Q9BS26 406 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NAT9Q9BTE0 207 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TSSK1BQ9BXA7 367 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZMYND15Q9H091 742 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ABCG4Q9H172 646 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SYNDIG1Q9H7V2 258 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SPATS2LQ9NUQ6 558 aaKnown RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TOR4AQ9NXH8 423 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SNX24Q9Y343 169 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DNMT3AQ9Y6K1 912 aaPredicted RBP10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RPS6KL1Q9Y6S9 549 aa10.83□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IGLV3-16A0A075B6K0 115 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LY6G6EA0A0G2JKS1 128 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KIR2DS5A0A0G2JLQ3 304 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 A0A0G2JNG1 304 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OR5K4A6NMS3 321 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RHPN2P1A8MT19 583 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KIR2DS3K7RE56 304 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CD3EAPO15446 510 aaKnown RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NOBOXO60393 691 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 POP7O75817 140 aaKnown RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 AP2A2O94973 939 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FTH1P02794 183 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ADRB1P08588 477 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OR56A5P0C7T3 313 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MYF5P13349 255 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 F3P13726 295 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GLB1P16278 677 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PGAM1P18669 254 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 IVDP26440 423 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HALP42357 657 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RPL21P46778 160 aaKnown RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PPM1FP49593 454 aaPredicted RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 MAZP56270 477 aaKnown RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 B4GALNT1Q00973 533 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 E2F1Q01094 437 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 KIR2DS5Q14953 304 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ANKRD20A4Q4UJ75 823 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 RNF187Q5TA31 235 aaPredicted RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 OGFOD3Q6PK18 319 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DHRS13Q6UX07 377 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PACS1Q6VY07 963 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SDCCAG8Q86SQ7 713 aaPredicted RBP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLC9B2Q86UD5 537 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SLCO6A1Q86UG4 719 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCNJLQ8IV13 435 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ZNF547Q8IVP9 402 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PIANPQ8IYJ0 282 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 NAGSQ8N159 534 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 PNPLA1Q8N8W4 532 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 HM13Q8TCT9 377 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CALML6Q8TD86 181 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 ADAMTS14Q8WXS8 1223 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 CCDC74AQ96AQ1 378 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 LRRC39Q96DD0 335 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 SGF29Q96ES7 293 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 WHRNQ9P202 907 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 FAM8A1Q9UBU6 413 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 TBC1D29Q9UFV1 150 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 GNPTGQ9UJJ9 305 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 U3KQA8 63 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 DMXL1Q9Y485 3027 aa10.82□□□□□ -0.68
CSPG4P1Y-201ENST00000306641 UNC13CQ8NB66 2214 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms