RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 PCSK7Q16549 785 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 SH3RF2Q8TEC5 729 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 SPATA33Q96N06 139 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 FCRL5Q96RD9 977 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 EPS8L2Q9H6S3 715 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 SEMA4BQ9NPR2 832 aaPredicted RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 PCDHGA10Q9Y5H3 936 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 ORC6Q9Y5N6 252 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 MIA3Q5JRA6 1907 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 A0A1B0GTL3 188 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 BCKDKO14874 412 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 GSTA4O15217 222 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 HOXC11O43248 304 aaPredicted RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 FADS2O95864 444 aaKnown RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 SCAPQ12770 1279 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 TRIP4Q15650 581 aaPredicted RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 SCIMPQ6UWF3 145 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 SVOPLQ8N434 492 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 MTMR14Q8NCE2 650 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 FAM83FQ8NEG4 500 aaPredicted RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 OR6P1Q8NGX9 317 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 PABPC5Q96DU9 382 aaKnown RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 CLIP3Q96DZ5 547 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 ITCHQ96J02 903 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 CDK5RAP1Q96SZ6 601 aaKnown RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 C6orf62Q9GZU0 229 aaPredicted RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 CARS2Q9HA77 564 aaKnown RBP18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 ITM2CQ9NQX7 267 aa18.68■□□□□ 0.58
CHRNB1-201ENST00000306071 PRMT5O14744 637 aaPredicted RBP18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 AREL1O15033 823 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 CACNG3O60359 315 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 PTTG1O95997 202 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 PLIN5Q00G26 463 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 PRSS48Q7RTY5 328 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 DPF3Q92784 378 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 TP53INP1Q96A56 240 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 GAD1Q99259 594 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 AS3MTQ9HBK9 375 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 POLR3BQ9NW08 1133 aaPredicted RBP18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 USE1Q9NZ43 259 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 LIMD1Q9UGP4 676 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 OSGIN1Q9UJX0 560 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 CRYL1Q9Y2S2 319 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 HBP1O60381 514 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 C22orf31O95567 290 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 FTH1P02794 183 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 GTF2E2P29084 291 aaKnown RBP18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 RABGGTBP53611 331 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 YWHAHQ04917 246 aaPredicted RBP18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 RAPSNQ13702 412 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 FBXO48Q5FWF7 155 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 ATPAF2Q8N5M1 289 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 LRRC52Q8N7C0 313 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 ZNF419Q96HQ0 510 aaPredicted RBP18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 TSGA13Q96PP4 275 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 DUSP16Q9BY84 665 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 DDX28Q9NUL7 540 aaKnown RBP18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 SNTG2Q9NY99 539 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 AASSQ9UDR5 926 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 ZNF221Q9UK13 617 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 UTS2RQ9UKP6 389 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 INVSQ9Y283 1065 aa18.67■□□□□ 0.58
CHRNB1-201ENST00000306071 SOWAHBA6NEL2 793 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 EFCAB9A8MZ26 197 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CCL22O00626 93 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 FYNP06241 537 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 GGT1P19440 569 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 RYKP34925 604 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 ADRA1AP35348 466 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 GRIK1P39086 918 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 TTC23LQ6PF05 361 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CATSPERGQ6ZRH7 1159 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CILP2Q8IUL8 1156 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CCDC117Q8IWD4 279 aaPredicted RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 ISG20Q96AZ6 181 aaKnown RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 SLC47A1Q96FL8 570 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 RGS18Q9NS28 235 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 TPRKBQ9Y3C4 175 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 UGT2A1Q9Y4X1 527 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 FNDC1Q4ZHG4 1894 aaPredicted RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 TNPO2O14787 897 aaKnown RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 TSPAN1O60635 241 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 GOT2P00505 430 aaKnown RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CD1DP15813 335 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 ACVR2AP27037 513 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 IL12AP29459 219 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CD6P30203 668 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CLK1P49759 484 aaKnown RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 MRPS15P82914 257 aaKnown RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 LCP2Q13094 533 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 TRAF3Q13114 568 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 OR4D1Q15615 310 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 NKG7Q16617 165 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 ZNF404Q494X3 552 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 SYT6Q5T7P8 510 aaPredicted RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 CCBE1Q6UXH8 406 aaPredicted RBP18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 KLHDC8BQ8IXV7 354 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 SYTL1Q8IYJ3 562 aa18.66■□□□□ 0.58
CHRNB1-201ENST00000306071 SLC22A15Q8IZD6 547 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms