RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 NEK3P51956 506 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 MRPS22P82650 360 aaKnown RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 KPNB1Q14974 876 aaKnown RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 AASDHQ4L235 1098 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 PAGE2BQ5JRK9 111 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 C9orf50Q5SZB4 431 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 GCNT7Q6ZNI0 430 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 KCTD14Q9BQ13 255 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 ITM2BQ9Y287 266 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 POLR3HQ9Y535 204 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TTC3P53804 2025 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TRIP12Q14669 1992 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 UPK3BL1B0FP48 263 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 UPK3BL2E5RIL1 263 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 QSOX1O00391 747 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 HNRNPA1P09651 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 GNPDA1P46926 289 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CNTN1Q12860 1018 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CHIT1Q13231 466 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 RAB41Q5JT25 222 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 EMC10Q5UCC4 262 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 GK5Q6ZS86 529 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CDHR3Q6ZTQ4 885 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 SHKBP1Q8TBC3 707 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 SPPL2AQ8TCT8 520 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 NUS1Q96E22 293 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TPD52L3Q96J77 140 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 C12orf66Q96MD2 445 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 SLC25A23Q9BV35 468 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 KLHL25Q9H0H3 589 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 EGFL7Q9UHF1 273 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CASP8AP2Q9UKL3 1982 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 SAC3D1A6NKF1 404 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 H0YGN5 161 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 AURKAO14965 403 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 VIPP01282 170 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 COX4I1P13073 169 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 PSMC3P17980 439 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 POU1F1P28069 291 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CHRNB3Q05901 458 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TP53BP2Q13625 1128 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 ACAP2Q15057 778 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 BRAT1Q6PJG6 821 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 C17orf64Q86WR6 236 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CILP2Q8IUL8 1156 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CENPLQ8N0S6 344 aaPredicted RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 TSTD1Q8NFU3 115 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 CLPTM1LQ96KA5 538 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 ASB2Q96Q27 587 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 SGK2Q9HBY8 427 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 MRGBPQ9NV56 204 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 DNMT3BQ9UBC3 853 aaKnown RBP10.07□□□□□ -0.8
GABRB3-201ENST00000299267 NFS1Q9Y697 457 aa10.07□□□□□ -0.8
GABRB3-201ENST00000299267 LDB2O43679 373 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 UBTFL6P0CB48 400 aaPredicted RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 DDX5P17844 614 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 EPORP19235 508 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PSMA4P25789 261 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PBX2P40425 430 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 RGRP47804 291 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 ESRRGP62508 458 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 VAC14Q08AM6 782 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 RUNX3Q13761 415 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 MAPKAPK3Q16644 382 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 TRIM71Q2Q1W2 868 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 CYP20A1Q6UW02 462 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 AMZ2Q86W34 360 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 HORMAD1Q86X24 394 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 SPPL3Q8TCT6 385 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 IL12RB2Q99665 862 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PHACTR1Q9C0D0 580 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 SEMA6AQ9H2E6 1030 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 NENFQ9UMX5 172 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 SAP18O00422 153 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 COL6A2P12110 1019 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 CDKN1CP49918 316 aaPredicted RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 ILF3Q12906 894 aaKnown RBP eCLIP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 GPRC6AQ5T6X5 926 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PNPT1Q8TCS8 783 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 TWIST2Q8WVJ9 160 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 RNF145Q96MT1 663 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 P2RY13Q9BPV8 354 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 KIFC1Q9BW19 673 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 SLC27A6Q9Y2P4 619 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 POP7O75817 140 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PGLSO95336 258 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 KLF8O95600 359 aaPredicted RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 SNRPB2P08579 225 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 OGNP20774 298 aaKnown RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 CLCNKAP51800 687 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 POLE2P56282 527 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 ZNF542PQ5EBM4 170 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 CAPN13Q6MZZ7 669 aaPredicted RBP10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PSAPL1Q6NUJ1 521 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 ZYG11AQ6WRX3 759 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 ARHGAP12Q8IWW6 846 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 RNF31Q96EP0 1072 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 PPM1MQ96MI6 270 aa10.06□□□□□ -0.8
GABRB3-201ENST00000299267 POLMQ9NP87 494 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms