RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 UXTQ9UBK9 157 aaPredicted RBP11.3□□□□□ -0.6
TRUB1-201ENST00000298746 PGAP2Q9UHJ9 254 aa11.3□□□□□ -0.6
TRUB1-201ENST00000298746 FAM47E-STBD1D6RA91 191 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 VPS4BO75351 444 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 TULP3O75386 442 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CAPN15O75808 1086 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 RAD51Q06609 339 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 OR4D1Q15615 310 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FAM187BQ17R55 369 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CYHR1Q6ZMK1 362 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 AHSA2Q719I0 299 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 P3H2Q8IVL5 708 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 TMEM199Q8N511 208 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ATG16L2Q8NAA4 619 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 AURKBQ96GD4 344 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 MRGPRX2Q96LB1 330 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ROGDIQ9GZN7 287 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 TUBB1Q9H4B7 451 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ZFP14Q9HCL3 533 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 AMBNQ9NP70 447 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ANKMY1Q9P2S6 941 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 POLR3HQ9Y535 204 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 GMPPBQ9Y5P6 360 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 E5RI56 91 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 MATN3O15232 486 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 UGT2B11O75310 529 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FKBP9O95302 570 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CHRNA1P02708 482 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 IFITM3Q01628 133 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 EMX1Q04741 257 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FOXM1Q08050 763 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CRY1Q16526 586 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 AGAP7PQ5VUJ5 663 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 TMEM207Q6UWW9 146 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FKBP9P1Q75LS8 142 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CNTN4Q8IWV2 1026 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 GOLM1Q8NBJ4 401 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 MINDY2Q8NBR6 621 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 TP63Q9H3D4 680 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 PRDM8Q9NQV8 689 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 DNAJB9Q9UBS3 223 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ADAMTS5Q9UNA0 930 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 A0A1B0GTL3 188 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CD3EAPO15446 510 aaKnown RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 PAGE1O75459 146 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 RECQL5O94762 991 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CD36P16671 472 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 AKT1P31749 480 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 SELENBP1Q13228 472 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 SELPLGQ14242 412 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 ADPRMQ3LIE5 342 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 DENND5AQ6IQ26 1287 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 TIGD7Q6NT04 549 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 PAQR3Q6TCH7 311 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 SPATA19Q7Z5L4 167 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 OR8H2Q8N162 312 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 OR13J1Q8NGT2 312 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 SH3RF2Q8TEC5 729 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 SENP8Q96LD8 212 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 DMRTB1Q96MA1 342 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CGREF1Q99674 301 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 RNF38Q9H0F5 515 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 FAM124BQ9H5Z6 455 aaPredicted RBP11.29□□□□□ -0.6
TRUB1-201ENST00000298746 RMND5AQ9H871 391 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CNGB3Q9NQW8 809 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 NDFIP2Q9NV92 336 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 GTF2IRD1Q9UHL9 959 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 CDH9Q9ULB4 789 aa11.29□□□□□ -0.6
TRUB1-201ENST00000298746 NPEPPSL1A6NEC2 478 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 RGS5O15539 181 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 MITFO75030 526 aaPredicted RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 JRKO75564 520 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 FYNP06241 537 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 HRH2P25021 359 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 IL12AP29459 219 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 TGFBR1P36897 503 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 GRIK1P39086 918 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 DEFA1P59665 94 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 DEFA3P59666 94 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CTU2Q2VPK5 515 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 UBE2UQ5VVX9 321 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CLHC1Q8NHS4 586 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 CDC26Q8NHZ8 85 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 FAM120BQ96EK7 910 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 PCED1BQ96HM7 432 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 SYTL2Q9HCH5 934 aa11.28□□□□□ -0.6
TRUB1-201ENST00000298746 TRMT13Q9NUP7 481 aaKnown RBP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRUB1-201ENST00000298746 SNX8Q9Y5X2 465 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms