RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 KLHL42Q9P2K6 505 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 STK25O00506 426 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 CD1DP15813 335 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 LSP1P33241 339 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 ACAP2Q15057 778 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 TMEM31Q5JXX7 168 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 INPP5DQ92835 1189 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 HIC2Q96JB3 615 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 TSNARE1Q96NA8 513 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 PANX3Q96QZ0 392 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 TEX101Q9BY14 249 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 EPHX3Q9H6B9 360 aa24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 SPATS2LQ9NUQ6 558 aaKnown RBP24.3■■□□□ 1.48
GTF2A1-201ENST00000298173 LRRC72A6NJI9 287 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 RAD51BO15315 384 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 TRIM16O95361 564 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 IRF4Q15306 451 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 LRRC8EQ6NSJ5 796 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 ADGRG6Q86SQ4 1221 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 ISCA2Q86U28 154 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 NKAPQ8N5F7 415 aaKnown RBP24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 DYDC1Q8WWB3 177 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 PDLIM5Q96HC4 596 aaKnown RBP24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 MAGEB18Q96M61 343 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 DERL2Q9GZP9 239 aa24.29■■□□□ 1.48
GTF2A1-201ENST00000298173 QSOX1O00391 747 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 PCCBP05166 539 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 GLRBP48167 497 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 IRX4P78413 519 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 MTAPQ13126 283 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 INPP5AQ14642 412 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 PDK4Q16654 411 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 DET1Q7L5Y6 550 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 FUBP1Q96AE4 644 aaKnown RBP24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 NECAB3Q96P71 396 aaPredicted RBP24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 MRPL57Q9BQC6 102 aaKnown RBP24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 C1QTNF7Q9BXJ2 289 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 PSD3Q9NYI0 1048 aa24.28■■□□□ 1.48
GTF2A1-201ENST00000298173 G3V2L1 256 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 BIRC5O15392 142 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 APOA4P06727 396 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 BPGMP07738 259 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 ITGB6P18564 788 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 OXTRP30559 389 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 MAT2AP31153 395 aaKnown RBP24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CTSCP53634 463 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 IL2P60568 153 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CDK3Q00526 305 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 TECRLQ5HYJ1 363 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 MAMSTRQ6ZN01 415 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 TRIM74Q86UV6 250 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 TAX1BP1Q86VP1 789 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 HEATR4Q86WZ0 1026 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 EEF1AKMT1Q8WVE0 214 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 UNKQ9C0B0 810 aaKnown RBP24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 SARS2Q9NP81 518 aaKnown RBP24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 WSB2Q9NYS7 404 aaPredicted RBP24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 COPG2Q9UBF2 871 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 LATO43561 262 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 MAGEC1O60732 1142 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CDK14O94921 469 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 SEMA4FO95754 770 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 AOAHP28039 575 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CCR7P32248 378 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 KPNA2P52292 529 aaKnown RBP24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 SIGLEC14Q08ET2 396 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 RGS9BPQ6ZS82 235 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CPNE9Q8IYJ1 553 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CAMKK1Q8N5S9 505 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 LGR4Q9BXB1 951 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 MRPL46Q9H2W6 279 aaKnown RBP24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 DLGAP2Q9P1A6 1054 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 SIRPGQ9P1W8 387 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 ATXN10Q9UBB4 475 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 CYP8B1Q9UNU6 501 aa24.27■■□□□ 1.48
GTF2A1-201ENST00000298173 WDR91A4D1P6 747 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 SRRM3A6NNA2 597 aaPredicted RBP24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 ZBTB14O43829 449 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 VEGFDO43915 354 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 LILRB5O75023 590 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 ZNF217O75362 1048 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 APBB3O95704 486 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 DCNP07585 359 aaKnown RBP24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 RBP1P09455 135 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 KCNC1P48547 511 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 PRLHRP49683 370 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 ATP6V0D1P61421 351 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 PCLAFQ15004 111 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 KLC3Q6P597 504 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 ZBTB2Q8N680 514 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 RDH11Q8TC12 318 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 PTERQ96BW5 349 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 TOE1Q96GM8 510 aaKnown RBP24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 IER2Q9BTL4 223 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 MECRQ9BV79 373 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 ZCCHC2Q9C0B9 1178 aaKnown RBP24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 OR2AG1Q9H205 316 aa24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 TFB2MQ9H5Q4 396 aaKnown RBP24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 CPSF2Q9P2I0 782 aaKnown RBP24.26■■□□□ 1.47
GTF2A1-201ENST00000298173 XPR1Q9UBH6 696 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms