RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 PFDN6O15212 129 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 SUPT3HO75486 399 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 ACRV1P26436 265 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 GALNT1Q10472 559 aaPredicted RBP21.11■□□□□ 0.97
SOX17-201ENST00000297316 ATP13A5Q4VNC0 1218 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 BRAT1Q6PJG6 821 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.11■□□□□ 0.97
SOX17-201ENST00000297316 LINGO1Q96FE5 620 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 RNF112Q9ULX5 631 aa21.11■□□□□ 0.97
SOX17-201ENST00000297316 A0A088AWK7 358 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 E5RI56 91 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 BTN3A1O00481 513 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 SNUPNO95149 360 aaKnown RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 PYGLP06737 847 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 GFAPP14136 432 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ITGAXP20702 1163 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 CLCN7P51798 805 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 CLNS1AP54105 237 aaKnown RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 POLR2LP62875 67 aaKnown RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 SH3BP2P78314 561 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ZNF234Q14588 700 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 PPP1R3AQ16821 1122 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 HSD11B1LQ7Z5J1 315 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 SCUBE1Q8IWY4 988 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 CBARPQ8N350 705 aaPredicted RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 CPSF7Q8N684 471 aaKnown RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 TERB1Q8NA31 727 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 STAG3L4Q8TBR4 150 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 KCNJ9Q92806 393 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 SLC7A8Q9UHI5 535 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 HCN2Q9UL51 889 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ITM2BQ9Y287 266 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 TRAF6Q9Y4K3 522 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 A0A1B0GTL3 188 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 TBC1D3BA6NDS4 549 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 C16orf96A6NNT2 1141 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 PLK4O00444 970 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ESR1P03372 595 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 LAMP2P13473 410 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 SPINT3P49223 89 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ADARP55265 1226 aaKnown RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 ATP6V0D1P61421 351 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 CUL3Q13618 768 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ZNF805Q5CZA5 627 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 CERS6Q6ZMG9 384 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 SCAMP4Q969E2 229 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 ZNF576Q9H609 170 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 CLDND1Q9NY35 253 aa21.1■□□□□ 0.97
SOX17-201ENST00000297316 COPG1Q9Y678 874 aaKnown RBP21.1■□□□□ 0.97
SOX17-201ENST00000297316 NCF1BA6NI72 391 aaPredicted RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 TRPC5OSA6NMA1 111 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 NCF1CA8MVU1 366 aaPredicted RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 UPK3BL1B0FP48 263 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 UPK3BL2E5RIL1 263 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 KPNA3O00505 521 aaPredicted RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 SORBS2O94875 1100 aaKnown RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 CDK14O94921 469 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 NCF1P14598 390 aaPredicted RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 PRDX6P30041 224 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 GDI1P31150 447 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 PPARGP37231 505 aaPredicted RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 HK3P52790 923 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 CES5AQ6NT32 575 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 PARS2Q7L3T8 475 aaKnown RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 SNX32Q86XE0 403 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 YAF2Q8IY57 180 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 NXPE1Q8N323 547 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 NKAPQ8N5F7 415 aaKnown RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 ACOX2Q99424 681 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 TRMOQ9BU70 441 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 CLPBQ9H078 707 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 MEAF6Q9HAF1 191 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 TMPRSS11EQ9UL52 423 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 LRRK1Q38SD2 2015 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 PSMC3P17980 439 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 CD9P21926 228 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 AGTR2P50052 363 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 ERFP50548 548 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 FOXA1P55317 472 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 ARHGEF7Q14155 803 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 C9orf64Q5T6V5 341 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 PTRHD1Q6GMV3 140 aaKnown RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 PELI3Q8N2H9 469 aa21.09■□□□□ 0.97
SOX17-201ENST00000297316 FBRSL1Q9HCM7 1045 aaKnown RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 MBD1Q9UIS9 605 aaPredicted RBP21.09■□□□□ 0.97
SOX17-201ENST00000297316 KRT36O76013 467 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 ZNF7P17097 686 aaPredicted RBP21.08■□□□□ 0.97
SOX17-201ENST00000297316 EEF1DP29692 281 aaKnown RBP21.08■□□□□ 0.97
SOX17-201ENST00000297316 SOX9P48436 509 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 VASPP50552 380 aaPredicted RBP21.08■□□□□ 0.97
SOX17-201ENST00000297316 GRIN2CQ14957 1233 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 UGT3A2Q3SY77 523 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 Q6ZVL8 140 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 RBFAQ8N0V3 343 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 ARHGAP24Q8N264 748 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 FBXO39Q8N4B4 442 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 CPA6Q8N4T0 437 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 EFCAB3Q8N7B9 438 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 PANX3Q96QZ0 392 aa21.08■□□□□ 0.97
SOX17-201ENST00000297316 TSPAN11A1L157 253 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms