RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 RPS24P62847 133 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 SULT1C3Q6IMI6 304 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 PARP8Q8N3A8 854 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 LIX1Q8N485 282 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 PPP1R14AQ96A00 147 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 LENG8Q96PV6 779 aaPredicted RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 HBEGFQ99075 208 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 EHD3Q9NZN3 535 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 ZNF624Q9P2J8 865 aaPredicted RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 CNTN6Q9UQ52 1028 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 WBP4O75554 376 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 ESR1P03372 595 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 C11orf88Q6PI97 169 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 FEM1CQ96JP0 617 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 BTBD9Q96Q07 612 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 TRIT1Q9H3H1 467 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 INTS10Q9NVR2 710 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 RAB23Q9ULC3 237 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 NPHS1O60500 1241 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 RASGRP1O95267 797 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 PRG2P13727 222 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 PRMT2P55345 433 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 GAD2Q05329 585 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 MED27Q6P2C8 311 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 RBM44Q6ZP01 1051 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 CMASQ8NFW8 434 aaPredicted RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 CYP2S1Q96SQ9 504 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 EBPLQ9BY08 206 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 HMG20AQ9NP66 347 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 IL6P05231 212 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 ANXA4P09525 319 aaPredicted RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 ASMTP46597 345 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 OGDHQ02218 1023 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 SLC25A11Q02978 314 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 METTL21CQ5VZV1 264 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 FAM220AQ7Z4H9 259 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 CNTD1Q8N815 330 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 OR13C4Q8NGS5 318 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 AUTS2Q8WXX7 1259 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 POP5Q969H6 163 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 CCSER2Q9H7U1 834 aa17.07■□□□□ 0.32
CDCP1-201ENST00000296129 CLK4Q9HAZ1 481 aaKnown RBP17.07■□□□□ 0.32
CDCP1-201ENST00000296129 OR51F1A6NGY5 319 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 XIAPP98170 497 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 TMEM220Q6QAJ8 160 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 OSTM1Q86WC4 334 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 LPGAT1Q92604 370 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 ESAMQ96AP7 390 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 CCDC177Q9NQR7 707 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-201ENST00000296129 FETUBQ9UGM5 382 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 ERGIC3Q9Y282 383 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 A0A1W2PRU2 124 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 GABRDO14764 452 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 TP73O15350 636 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 F7P08709 466 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-201ENST00000296129 BMP7P18075 431 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 PRDX6P30041 224 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 SCNN1AP37088 669 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 CCDC189A1A4V9 331 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 CAPN1P07384 714 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 RPL5P46777 297 aaKnown RBP17.06■□□□□ 0.32
CDCP1-201ENST00000296129 LIPEQ05469 1076 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 CHIT1Q13231 466 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 RFTN1Q14699 578 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-201ENST00000296129 GALNT5Q7Z7M9 940 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 SLC25A12O75746 678 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 RFX4Q33E94 735 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 TPGS2Q68CL5 300 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 GKN1Q9NS71 199 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 ERVW-1Q9UQF0 538 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 NUP188Q5SRE5 1749 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 AOC2O75106 756 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 UGT2B17O75795 530 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 NUP62P37198 522 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-201ENST00000296129 OLFML1Q6UWY5 402 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 SLC35F5Q8WV83 523 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 RAD51AP1Q96B01 352 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 INTS7Q9NVH2 962 aaKnown RBP17.06■□□□□ 0.32
CDCP1-201ENST00000296129 MAP4K5Q9Y4K4 846 aa17.06■□□□□ 0.32
CDCP1-201ENST00000296129 A0A0U1RQF3 1178 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 ASNA1O43681 348 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 ATP12AP54707 1039 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 LAPTM5Q13571 262 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 GPR107Q5VW38 600 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 PTCHD4Q6ZW05 846 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 FAM129CQ86XR2 697 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 CIB1Q99828 191 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 KDM3BQ7LBC6 1761 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 CCDC162PA2VCL2 907 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 PRKCGP05129 697 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 UBASH3BQ8TF42 649 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 SEZ6LQ9BYH1 1024 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 GULP1Q9UBP9 304 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 YIPF1Q9Y548 306 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 COLEC10Q9Y6Z7 277 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 VIPP01282 170 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 ITGADQ13349 1161 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 DNAJB7Q7Z6W7 309 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms