RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 RPS3P23396 243 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCDC78-201ENST00000293889 CNTFP26441 200 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 NSG1P42857 185 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 TMEM115Q12893 351 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-201ENST00000293889 CTSL3PQ5NE16 218 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 RBM20Q5T481 1227 aaKnown RBP17.56■□□□□ 0.4
CCDC78-201ENST00000293889 LGSNQ5TDP6 509 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 ADGRG6Q86SQ4 1221 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 DCLK2Q8N568 766 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 GPATCH11Q8N954 259 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 HEXDCQ8WVB3 486 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 FOXJ1Q92949 421 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 HSPA12BQ96MM6 686 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 PHOX2BQ99453 314 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 GPR22Q99680 433 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 DUSP15Q9H1R2 295 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-201ENST00000293889 TRIM39Q9HCM9 518 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 PHPT1Q9NRX4 125 aaPredicted RBP17.56■□□□□ 0.4
CCDC78-201ENST00000293889 TMEM98Q9Y2Y6 226 aa17.56■□□□□ 0.4
CCDC78-201ENST00000293889 FAM95CA0A1B0GW59 222 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 MEI4A8MW99 385 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 TRIM49D1C9J1S8 452 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 SNRPAP09012 282 aaKnown RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 ATP1B2P14415 290 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 PKMP14618 531 aaKnown RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 CD27P26842 260 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 NHLH1Q02575 133 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 SIM2Q14190 667 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 PLK5Q496M5 336 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 SWT1Q5T5J6 900 aaKnown RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 CEP68Q76N32 757 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 DET1Q7L5Y6 550 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 RASGEF1AQ8N9B8 481 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 MDM1Q8TC05 714 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 MZB1Q8WU39 189 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 ELMO2Q96JJ3 720 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 CABS1Q96KC9 395 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 AARSD1Q9BTE6 412 aaKnown RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 OR2AG1Q9H205 316 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 ATXN10Q9UBB4 475 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 EIF2B4Q9UI10 523 aaKnown RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 SLC39A10Q9ULF5 831 aa17.55■□□□□ 0.4
CCDC78-201ENST00000293889 CORO1CQ9ULV4 474 aaPredicted RBP17.55■□□□□ 0.4
CCDC78-201ENST00000293889 CFAP99D6REC4 459 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 RASSF9O75901 435 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ESR1P03372 595 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 RALBP11234 206 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 MYCLP1P12525 358 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 SAT1P21673 171 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 MAOBP27338 520 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ATP5DP30049 168 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 HNRNPH1P31943 449 aaKnown RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 PFN3P60673 137 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ILF2Q12905 390 aaKnown RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 PDE1CQ14123 709 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 HECTD2Q5U5R9 776 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ICE2Q659A1 982 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 MACC1Q6ZN28 852 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 PRR23BQ6ZRT6 265 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 LPCAT2Q7L5N7 544 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CPLX4Q7Z7G2 160 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CCT6BQ92526 530 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 SGF29Q96ES7 293 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ZC3H10Q96K80 434 aaKnown RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 SLC6A18Q96N87 628 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CCDC68Q9H2F9 335 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CAB39LQ9H9S4 337 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 GNPTGQ9UJJ9 305 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 VWA7Q9Y334 891 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 PCDHB1Q9Y5F3 818 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 GON4LQ3T8J9 2241 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CACNB4O00305 520 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 SGTAO43765 313 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ASMTLO95671 621 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 HOXC4P09017 264 aaPredicted RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 KRT15P19012 456 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 POLD2P49005 469 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 PGGT1BP53609 377 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CDKN2DP55273 166 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 TAS2R39P59534 338 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 TIAL1Q01085 375 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 LPAL2Q16609 132 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 PTRHD1Q6GMV3 140 aaKnown RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 DOK6Q6PKX4 331 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 KYAT3Q6YP21 454 aaKnown RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ARMCX6Q7L4S7 300 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ABI3BPQ7Z7G0 1075 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 SUMF1Q8NBK3 374 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 CCDC197Q8NCU1 140 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 MTBPQ96DY7 904 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 OLFM1Q99784 485 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 ZCCHC2Q9C0B9 1178 aaKnown RBP17.54■□□□□ 0.4
CCDC78-201ENST00000293889 MED16Q9Y2X0 877 aa17.54■□□□□ 0.4
CCDC78-201ENST00000293889 FRYLO94915 3013 aa17.53■□□□□ 0.4
CCDC78-201ENST00000293889 A0A1W2PPM1 405 aa17.53■□□□□ 0.4
CCDC78-201ENST00000293889 IQCF5A8MTL0 148 aa17.53■□□□□ 0.4
CCDC78-201ENST00000293889 VEGFDO43915 354 aa17.53■□□□□ 0.4
CCDC78-201ENST00000293889 NIPSNAP2O75323 286 aa17.53■□□□□ 0.4
CCDC78-201ENST00000293889 CDK14O94921 469 aa17.53■□□□□ 0.4
CCDC78-201ENST00000293889 ALDOAP04075 364 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms