RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PRPF19Q9UMS4 504 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 TOP3BO95985 862 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 FOXM1Q08050 763 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 PPIDQ08752 370 aaKnown RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 ARL13AQ5H913 290 aaPredicted RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 IL23RQ5VWK5 629 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 MFSD5Q6N075 450 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 TWIST2Q8WVJ9 160 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SHPRHQ149N8 1683 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 PCSK2P16519 638 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 DHPSP49366 369 aaPredicted RBP18.35■□□□□ 0.53
PCDH1-201ENST00000287008 LDLRAD1Q5T700 205 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 ADGRD1Q6QNK2 874 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 SERINC5Q86VE9 423 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 DENND6AQ8IWF6 608 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 IGSF21Q96ID5 467 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 CLN6Q9NWW5 311 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 LTN1O94822 1766 aa18.35■□□□□ 0.53
PCDH1-201ENST00000287008 MATN4O95460 622 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 HAPLN1P10915 354 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 LGALS3BPQ08380 585 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 NUS1Q96E22 293 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 C5orf34Q96MH7 638 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 HOPXQ9BPY8 73 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 RAB11FIP5Q9BXF6 653 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 SMOC2Q9H3U7 446 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 SQORQ9Y6N5 450 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 SRSF11Q05519 484 aaKnown RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 SLC10A7Q0GE19 358 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 NR1D2Q14995 579 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 FBXO48Q5FWF7 155 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 ENPP7Q6UWV6 458 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 PPM1MQ96MI6 270 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 ZNF184Q99676 751 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 RACGAP1Q9H0H5 632 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 EGFL7Q9UHF1 273 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 IKZF3Q9UKT9 509 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 GALTP07902 379 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 CSF2RAP15509 400 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 HOXB6P17509 224 aaKnown RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 HCAR3P49019 387 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 CACNA2D1P54289 1103 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 ARMC4Q5T2S8 1044 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 CCNFP41002 786 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 TAS2R41P59536 307 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 HEPACAMQ14CZ8 416 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 ZIK1Q3SY52 487 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 PRR23BQ6ZRT6 265 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 Q6ZVU0 165 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 NET1Q7Z628 596 aaPredicted RBP18.34■□□□□ 0.53
PCDH1-201ENST00000287008 OSTM1Q86WC4 334 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 SLC35F5Q8WV83 523 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 BCO2Q9BYV7 579 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 HDHD2Q9H0R4 259 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 MAGEL2Q9UJ55 1249 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 CACNA1FO60840 1977 aa18.34■□□□□ 0.53
PCDH1-201ENST00000287008 CICQ96RK0 1608 aaPredicted RBP18.33■□□□□ 0.53
PCDH1-201ENST00000287008 SNAP91O60641 907 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 SIN3BO75182 1162 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 GTF2H2Q13888 395 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 DGCR6Q14129 220 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 GTF2H2CQ6P1K8 395 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.33■□□□□ 0.53
PCDH1-201ENST00000287008 CACTIN-AS1Q8N1I8 211 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 ZNF366Q8N895 744 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 ZCCHC10Q8TBK6 192 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 BTBD1Q9H0C5 482 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 ROBO1Q9Y6N7 1651 aa18.33■□□□□ 0.53
PCDH1-201ENST00000287008 KNDC1Q76NI1 1749 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 TULP2O00295 520 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 ACP5P13686 325 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 MAGEA11P43364 429 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 VPS26BQ4G0F5 336 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 HFE2Q6ZVN8 426 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 IFNLR1Q8IU57 520 aaPredicted RBP18.33■□□□□ 0.52
PCDH1-201ENST00000287008 SLC22A18Q96BI1 424 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 NDUFS1P28331 727 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 RFX4Q33E94 735 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 PLEKHG4Q58EX7 1191 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 EOGTQ5NDL2 527 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 TRIQKQ629K1 86 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 ALYREFQ86V81 257 aaKnown RBP18.33■□□□□ 0.52
PCDH1-201ENST00000287008 ZCCHC7Q8N3Z6 543 aaKnown RBP18.33■□□□□ 0.52
PCDH1-201ENST00000287008 TEX47Q8TBZ9 253 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 RNPEPL1Q9HAU8 725 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 IL36AQ9UHA7 158 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 CCDC162PA2VCL2 907 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 PLIN3O60664 434 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 UROSP10746 265 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 DRD4P21917 467 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 AQP1P29972 269 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 MTHFRP42898 656 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 TEAD2Q15562 447 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 ZNF776Q68DI1 518 aaPredicted RBP18.33■□□□□ 0.52
PCDH1-201ENST00000287008 SLC39A4Q6P5W5 647 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 ERICH5Q6P6B1 374 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 GALNT18Q6P9A2 607 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 ZYG11AQ6WRX3 759 aa18.33■□□□□ 0.52
PCDH1-201ENST00000287008 PRSS58Q8IYP2 241 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms