RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 POLR1EQ9GZS1 481 aaKnown RBP13.27□□□□□ -0.29
SCAF4-201ENST00000286835 LHPPQ9H008 270 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 LTB4R2Q9NPC1 389 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 AGPAT4Q9NRZ5 378 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 INTS10Q9NVR2 710 aaKnown RBP13.27□□□□□ -0.29
SCAF4-201ENST00000286835 AASSQ9UDR5 926 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 NT5C1B-RDH14C9J2C7 533 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 CAPN1P07384 714 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ACADVLP49748 655 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 TPTEP56180 551 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF846Q147U1 533 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 KIAA0319Q5VV43 1072 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 PELI3Q8N2H9 469 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF540Q8NDQ6 660 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 PTCD2Q8WV60 388 aaKnown RBP13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ITCHQ96J02 903 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 SEZ6LQ9BYH1 1024 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ACTR8Q9H981 624 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 ARMC1Q9NVT9 282 aa13.27□□□□□ -0.29
SCAF4-201ENST00000286835 TUBA8Q9NY65 449 aaPredicted RBP13.27□□□□□ -0.29
SCAF4-201ENST00000286835 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.27□□□□□ -0.296e-8■□□□□ 9.9
SCAF4-201ENST00000286835 EIF3LQ9Y262 564 aaKnown RBP13.27□□□□□ -0.29
SCAF4-201ENST00000286835 SMIM35A0A1B0GVV1 85 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 CNOT3O75175 753 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 LRATO95237 230 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 HAPLN1P10915 354 aaPredicted RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 GRK4P32298 578 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 MAGEA8P43361 318 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 IL2P60568 153 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 DDX39BQ13838 428 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 C6orf183Q5T699 404 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 INTS11Q5TA45 600 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 PRR23BQ6ZRT6 265 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SIDT2Q8NBJ9 832 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TBC1D15Q8TC07 691 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 PPP1R14BQ96C90 147 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SLC47A1Q96FL8 570 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TRIM54Q9BYV2 358 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ASPSCR1Q9BZE9 553 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TBCCD1Q9NVR7 557 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 IRAK2O43187 625 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 FKTNO75072 461 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 NIPSNAP2O75323 286 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ECI2O75521 394 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 GJB3O75712 270 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 DBTP11182 482 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 MRPS15P82914 257 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 HTRA3P83110 453 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 DGUOKQ16854 277 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SLC36A3Q495N2 470 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ITIH5Q86UX2 942 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM86AQ8N2M4 240 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM151AQ8N4L1 468 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 POC5Q8NA72 575 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ZMIZ2Q8NF64 920 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SGCDQ92629 289 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 FBXO32Q969P5 355 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 GPR63Q9BZJ6 419 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 MIR1-1HGQ9H1L0 117 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TRMT13Q9NUP7 481 aaKnown RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 CD300AQ9UGN4 299 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 PADI3Q9ULW8 664 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SEPT4O43236 478 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SLC7A4O43246 635 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 VPS4BO75351 444 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ALOX12P18054 663 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TRIP4Q15650 581 aaPredicted RBP13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF792Q3KQV3 632 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF773Q6PK81 442 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ARL10Q8N8L6 244 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SNX19Q92543 992 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SERPINB11Q96P15 392 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 SLC30A3Q99726 388 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 ZYG11BQ9C0D3 744 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 RMI1Q9H9A7 625 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 MAGEL2Q9UJ55 1249 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 C3orf18Q9UK00 162 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 PTCH2Q9Y6C5 1203 aa13.26□□□□□ -0.29
SCAF4-201ENST00000286835 H0Y858 1186 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 FUCA1P04066 466 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ZNF135P52742 658 aaPredicted RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ATP6AP1Q15904 470 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ANKRD26P1Q6NSI1 321 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 MAMDC4Q6UXC1 1216 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 Q6ZNX1 250 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 RTL3Q8N8U3 475 aaKnown RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 HMGCLL1Q8TB92 370 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 MAELQ96JY0 434 aaKnown RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 YME1L1Q96TA2 773 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 LRRC3Q9BY71 257 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 ARHGAP39Q9C0H5 1083 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 RERGLQ9H628 205 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 AMBNQ9NP70 447 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 EXOSC4Q9NPD3 245 aaKnown RBP13.25□□□□□ -0.29
SCAF4-201ENST00000286835 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 IQCF5A8MTL0 148 aa13.25□□□□□ -0.29
SCAF4-201ENST00000286835 S1PR4O95977 384 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms