RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 LGR4Q9BXB1 951 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 PCED1AQ9H1Q7 454 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 EPHX3Q9H6B9 360 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 CCDC134Q9H6E4 229 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 GPAMQ9HCL2 828 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 MBD1Q9UIS9 605 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 INVSQ9Y283 1065 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 OR1A2Q9Y585 309 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 BDP1A6H8Y1 2624 aa18.66■□□□□ 0.58
PDLIM3-202ENST00000284770 QSOX1O00391 747 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 FPGTO14772 594 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 LAMTOR5O43504 91 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 SGTAO43765 313 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 VEGFDO43915 354 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 CDK14O94921 469 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 WISP3O95389 354 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 TOP3BO95985 862 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 AKT2P31751 481 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 CLCN7P51798 805 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 DMWDQ09019 674 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 PDAP1Q13442 181 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 UGT3A1Q6NUS8 523 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 TSSK4Q6SA08 328 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 CADM4Q8NFZ8 388 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 FUBP1Q96AE4 644 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 PANX3Q96QZ0 392 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 MYOCQ99972 504 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 OR2AG1Q9H205 316 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 PHPT1Q9NRX4 125 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 GALPQ9UBC7 116 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 DCDC2Q9UHG0 476 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 GRID1Q9ULK0 1009 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 DMTF1Q9Y222 760 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 ANKRD6Q9Y2G4 727 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 PLLPQ9Y342 182 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 DOCK9Q9BZ29 2069 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 A0A087X1B8 175 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 F8W8V4 182 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 TRIM16O95361 564 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 DHRS4L1P0CG22 281 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 MYCLP1P12525 358 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 LVRNQ6Q4G3 990 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 CLEC14AQ86T13 490 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 C1orf210Q8IVY1 113 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 TMEM105Q8N8V8 129 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 TMEM145Q8NBT3 493 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 APOOQ9BUR5 198 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 FAM126AQ9BYI3 521 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 LATS2Q9NRM7 1088 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 ATXN10Q9UBB4 475 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 DHRS7Q9Y394 339 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 HS3ST3A1Q9Y663 406 aa18.65■□□□□ 0.58
PDLIM3-202ENST00000284770 POM121BA6NF01 834 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 OR2AG2A6NM03 316 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 PRAMEF26H0Y7S4 382 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 DNAJC6O75061 913 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 HOXC4P09017 264 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 COL6A2P12110 1019 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 TDGF1P13385 188 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 GMPRP36959 345 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 SLC26A3P40879 764 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 CTSCP53634 463 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 CLDN2P57739 230 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 IRF9Q00978 393 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 PAQR3Q6TCH7 311 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 TMEM207Q6UWW9 146 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 SLC36A4Q6YBV0 504 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 SIDT2Q8NBJ9 832 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 LKAAEAR1Q8TD35 194 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 CD200R1Q8TD46 325 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 CKAP2Q8WWK9 683 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 ZNF514Q96K75 400 aaPredicted RBP18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 BMFQ96LC9 184 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 UBXN10Q96LJ8 280 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 FAM111AQ96PZ2 611 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 TSSK1BQ9BXA7 367 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 SYTL2Q9HCH5 934 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 SPATS2LQ9NUQ6 558 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 TRMT6Q9UJA5 497 aaKnown RBP18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 TMEM98Q9Y2Y6 226 aa18.64■□□□□ 0.57
PDLIM3-202ENST00000284770 A0A1W2PPC4 97 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 SRRM3A6NNA2 597 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 METTL12A8MUP2 240 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GLRA3O75311 464 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GSTA1P08263 222 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 ZNF37AP17032 561 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 PRLHRP49683 370 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 RPL6Q02878 288 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GTF2H3Q13889 308 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 INSCQ1MX18 579 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 TMEM220Q6QAJ8 160 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 BMP8AQ7Z5Y6 402 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 TBC1D1Q86TI0 1168 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 LCA5Q86VQ0 697 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 CENPLQ8N0S6 344 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 PLD6Q8N2A8 252 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 GIMAP7Q8NHV1 300 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 FOXJ1Q92949 421 aa18.63■□□□□ 0.57
PDLIM3-202ENST00000284770 SLC30A3Q99726 388 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms