RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 GNPDA1P46926 289 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 DRG2P55039 364 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 TRIM28Q13263 835 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 C1orf186Q6ZWK4 172 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 USP49Q70CQ1 688 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 UBE2Q1Q7Z7E8 422 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 POF1BQ8WVV4 589 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 OVCA2Q8WZ82 227 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SEMA3CQ99985 751 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 LRTM1Q9HBL6 345 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SNX15Q9NRS6 342 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 AGO1Q9UL18 857 aaKnown RBP8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CLTCL1P53675 1640 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 A0A0J9YVX5 310 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CYP1A2P05177 515 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 TACSTD2P09758 323 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ZPBP2Q6X784 338 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 KCTD8Q6ZWB6 473 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 NSMCE3Q96MG7 304 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 LACTBL1A8MY62 500 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 RBL1P28749 1068 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ABCG1P45844 678 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 CDH8P55286 799 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 AMIGO2Q86SJ2 522 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 SLC39A3Q9BRY0 314 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ZSCAN5AQ9BUG6 496 aa8.66□□□□□ -1.02
NIPBL-201ENST00000282516 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 E5RJQ4 531 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 ASLP04424 464 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 ZNF782Q6ZMW2 699 aaPredicted RBP8.65□□□□□ -1.02
NIPBL-201ENST00000282516 UNC5AQ6ZN44 842 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 ATP6V1C2Q8NEY4 427 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 COPS8Q99627 209 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 IFT27Q9BW83 186 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SPAG17Q6Q759 2223 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 TBL1XO60907 577 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 FESP07332 822 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 INSRRP14616 1297 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 HNRNPLP14866 589 aaKnown RBP eCLIP8.65□□□□□ -1.023e-7■■■□□ 16.3
NIPBL-201ENST00000282516 GFOD2Q3B7J2 385 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 C16orf46Q6P387 395 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SMARCD3Q6STE5 483 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 TMEM39AQ9NV64 488 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SPATA7Q9P0W8 599 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 MAP4K5Q9Y4K4 846 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 PER2O15055 1255 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 GNAO1P09471 354 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SP100P23497 879 aaPredicted RBP8.65□□□□□ -1.02
NIPBL-201ENST00000282516 MAP3K8P41279 467 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 OR2B6P58173 313 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 MTMR8Q96EF0 704 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 DNAJC18Q9H819 358 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 NUDT15Q9NV35 164 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 HEBP2Q9Y5Z4 205 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 VIRMAQ69YN4 1812 aaKnown RBP8.65□□□□□ -1.02
NIPBL-201ENST00000282516 PNLIPRP1P54315 467 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 ECT2LQ008S8 904 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 TEAD4Q15561 434 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 ALYREFQ86V81 257 aaKnown RBP8.65□□□□□ -1.02
NIPBL-201ENST00000282516 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 MREGQ8N565 214 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 DMRTB1Q96MA1 342 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 DNAJC28Q9NX36 388 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 NUDT4Q9NZJ9 180 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 PCDHB9Q9Y5E1 797 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SLC1A2P43004 574 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 RAB15P59190 212 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 TLR1Q15399 786 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SPIN3Q5JUX0 258 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 RAVER1Q8IY67 606 aaKnown RBP8.65□□□□□ -1.02
NIPBL-201ENST00000282516 SOCS4Q8WXH5 440 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 EBNA1BP2Q99848 306 aaKnown RBP8.65□□□□□ -1.02
NIPBL-201ENST00000282516 ADAM7Q9H2U9 754 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 C14orf105Q9NVL8 296 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 NOX1Q9Y5S8 564 aa8.65□□□□□ -1.02
NIPBL-201ENST00000282516 GPR75-ASB3A0A0A6YYF3 556 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 RHPN2P1A8MT19 583 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 LIASO43766 372 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 KERAO60938 352 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 PON3Q15166 354 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF792Q3KQV3 632 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ZC3H12AQ5D1E8 599 aaKnown RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 POMZP3Q6PJE2 187 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CEP97Q8IW35 865 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 TRIM43Q96BQ3 446 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CENPNQ96H22 339 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 PPM1MQ96MI6 270 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 RHOJQ9H4E5 214 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 IGFLR1Q9H665 355 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 IMP3Q9NV31 184 aaKnown RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ERVW-1Q9UQF0 538 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 SPATA31E1Q6ZUB1 1445 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 A0A0J9YYE9 177 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 CPSF4LA6NMK7 179 aaKnown RBP8.65□□□□□ -1.03
NIPBL-201ENST00000282516 H3BM21 787 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 ACKR2O00590 384 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 RASGRP1O95267 797 aa8.65□□□□□ -1.03
NIPBL-201ENST00000282516 MSL3P1P0C860 447 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms