RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 DCBLD1Q8N8Z6 715 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 NTAN1Q96AB6 310 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 EFHD2Q96C19 240 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CCDC126Q96EE4 140 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ZNF347Q96SE7 839 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 KLHL25Q9H0H3 589 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TOR3AQ9H497 397 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 FAM124BQ9H5Z6 455 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 WDCPQ9H6R7 721 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CARS2Q9HA77 564 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 AASSQ9UDR5 926 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PADI3Q9ULW8 664 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TIMM13Q9Y5L4 95 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 FNDC1Q4ZHG4 1894 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CLDN25C9JDP6 229 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 KPNA4O00629 521 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 AZIN1O14977 448 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 C1RP00736 705 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PRDX3P30048 256 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SCAPQ12770 1279 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 OR4D1Q15615 310 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 KIAA0930Q6ICG6 404 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PRMT9Q6P2P2 845 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 RBM23Q86U06 439 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ABI1Q8IZP0 508 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 Q8N9G6 341 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PABPC5Q96DU9 382 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ITCHQ96J02 903 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 VAT1Q99536 393 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PRDM5Q9NQX1 630 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SDR39U1Q9NRG7 319 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ZNF639Q9UID6 485 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ERVK-11Q9UQG0 969 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TMA7Q9Y2S6 64 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 AAR2Q9Y312 384 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PCDHB3Q9Y5E6 796 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 CACNG3O60359 315 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 MAXP61244 160 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 HERVK_113P63132 956 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TMEM236Q5W0B7 351 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TBC1D21Q8IYX1 336 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ZMIZ2Q8NF64 920 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 OR6P1Q8NGX9 317 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 RNF34Q969K3 372 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SDCCAG3Q96C92 435 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SMOQ99835 787 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ERVK-6Q9BXR3 956 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 ATP13A3Q9H7F0 1226 aa11.24□□□□□ -0.61
SCLT1-201ENST00000281142 SEMA4BQ9NPR2 832 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PAK1IP1Q9NWT1 392 aaPredicted RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
SCLT1-201ENST00000281142 TNRC18O15417 2968 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 ANKRD34BA5PLL1 514 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 A6NL46 340 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 FCGR1AP12314 374 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 IL12AP29459 219 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 GP2P55259 537 aaKnown RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 IHHQ14623 411 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 KYAT1Q16773 422 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 FAM209AQ5JX71 171 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 SLCO6A1Q86UG4 719 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 TAC4Q86UU9 113 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 SLC22A9Q8IVM8 553 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 ATPAF2Q8N5M1 289 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 OR13J1Q8NGT2 312 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 NDNFQ8TB73 568 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 L3HYPDHQ96EM0 354 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 FCRL5Q96RD9 977 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 PSD2Q9BQI7 771 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 SLC39A8Q9C0K1 460 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 CRTAC1Q9NQ79 661 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 RBM22Q9NW64 420 aaKnown RBP eCLIP11.23□□□□□ -0.617e-6■■■■□ 24.6
SCLT1-201ENST00000281142 MTRRQ9UBK8 725 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 GPR45Q9Y5Y3 372 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 ALPLP05186 524 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 C7P10643 843 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 THRBP10828 461 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 PTPN2P17706 415 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 LBPP18428 481 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 TGFBR1P36897 503 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 POLD2P49005 469 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 MTPNP58546 118 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 GALNT1Q10472 559 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 DAG1Q14118 895 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 PCBP1Q15365 356 aaKnown RBP eCLIP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 CTF1Q16619 201 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 CHDHQ8NE62 594 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 BPIFB1Q8TDL5 484 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 ESAMQ96AP7 390 aa11.23□□□□□ -0.61
SCLT1-201ENST00000281142 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 ZNF641Q96N77 438 aaPredicted RBP11.23□□□□□ -0.61
SCLT1-201ENST00000281142 SLC9A7Q96T83 725 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms