RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DBN1Q16643 649 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 WHAMMP3Q1A5X7 153 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 BBS9Q3SYG4 887 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 DNAJC21Q5F1R6 531 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 DNTTIP2Q5QJE6 756 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 HP1BP3Q5SSJ5 553 aaPredicted RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 RNASEH2BQ5TBB1 312 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 LYPLAL1Q5VWZ2 237 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 C8orf74Q6P047 294 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ZNF449Q6P9G9 518 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 FOXR1Q6PIV2 292 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 MAATS1Q7Z4T9 603 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 LDB1Q86U70 411 aaPredicted RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 SLC9B2Q86UD5 537 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CCNJLQ8IV13 435 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ZNF547Q8IVP9 402 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 NAGSQ8N159 534 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 PDIK1LQ8N165 341 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 MPP5Q8N3R9 675 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 GALNT15Q8N3T1 639 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ARL14Q8N4G2 192 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CLDN19Q8N6F1 224 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 NAT8LQ8N9F0 302 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 MCUQ8NE86 351 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 GPR156Q8NFN8 814 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 OR6C4Q8NGE1 309 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 OR13J1Q8NGT2 312 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 KIF18AQ8NI77 898 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 DTX3LQ8TDB6 740 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SLC37A2Q8TED4 501 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SLCO2A1Q92959 643 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CXorf40BQ96DE9 158 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 MFSD3Q96ES6 412 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CCDC97Q96F63 343 aaPredicted RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 STAMBPL1Q96FJ0 436 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CFAP36Q96G28 342 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SCARF2Q96GP6 870 aaPredicted RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 AHCYL2Q96HN2 611 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 GFM1Q96RP9 751 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 SLC38A3Q99624 504 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 TSSK1BQ9BXA7 367 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 PPANQ9NQ55 473 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 IMP3Q9NV31 184 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 KCNK4Q9NYG8 393 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 IL1RAPL1Q9NZN1 696 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SLC23A2Q9UGH3 650 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CDC23Q9UJX2 597 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SOX13Q9UN79 622 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 CLCA2Q9UQC9 943 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 SNX24Q9Y343 169 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 UTP11Q9Y3A2 253 aaKnown RBP6.43□□□□□ -1.38
CD44-204ENST00000279452 NEU2Q9Y3R4 380 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 ST14Q9Y5Y6 855 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 RPS6KL1Q9Y6S9 549 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 U3KQA8 63 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 LRRK1Q38SD2 2015 aa6.43□□□□□ -1.38
CD44-204ENST00000279452 COL5A1P20908 1838 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 KIR2DS5A0A0G2JLQ3 304 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 A0A0G2JNG1 304 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 EME2A4GXA9 379 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 FAM187AA6NFU0 413 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 OR52A4PA6NMU1 304 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 KIR2DS3K7RE56 304 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 QSOX1O00391 747 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 NDC80O14777 642 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CD3EAPO15446 510 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 RAD51CO43502 376 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 OR1I1O60431 355 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CSO75390 466 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 NDUFS3O75489 264 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 EML2O95834 649 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 MT-CO3P00414 261 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 VIPP01282 170 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 FTH1P02794 183 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 OR56A5P0C7T3 313 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PGAM1P18669 254 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 NSG1P42857 185 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 MAGEA6P43360 314 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 TTPAP49638 278 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PRLHRP49683 370 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CLCNKAP51800 687 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 EIF3BP55884 814 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 ARL4CP56559 192 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 OR1D5P58170 312 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 CCL7P80098 99 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 B4GALNT1Q00973 533 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 INSM1Q01101 510 aaPredicted RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 FOXK2Q01167 660 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 DHX9Q08211 1270 aaKnown RBP6.42□□□□□ -1.38
CD44-204ENST00000279452 TARDBPQ13148 414 aaKnown RBP eCLIP6.42□□□□□ -1.38
CD44-204ENST00000279452 SEMA3AQ14563 771 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 ITIH4Q14624 930 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 KIR2DS5Q14953 304 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 MORF4L2Q15014 288 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PLCL1Q15111 1095 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 HIF1AQ16665 826 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 BCL7AQ4VC05 210 aa6.42□□□□□ -1.38
CD44-204ENST00000279452 PHF19Q5T6S3 580 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms