RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 DPEP2Q9H4A9 486 aa11.17□□□□□ -0.62
USP6NL-201ENST00000277575 DNAJC28Q9NX36 388 aa11.17□□□□□ -0.62
USP6NL-201ENST00000277575 ADGRE2Q9UHX3 823 aa11.17□□□□□ -0.62
USP6NL-201ENST00000277575 STRCP1A6NGW2 1772 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 FAM25AB3EWG3 89 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 FAM25CB3EWG5 89 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 FAM25GB3EWG6 89 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 C9JVG2 144 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PRKCGP05129 697 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 HAPLN1P10915 354 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 MAGEA10P43363 369 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PLEKHG4Q58EX7 1191 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 UBXN11Q5T124 520 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 MED27Q6P2C8 311 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SNX20Q7Z614 316 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF280BQ86YH2 543 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 HPS6Q86YV9 775 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 FAM13CQ8NE31 585 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 OR2AP1Q8NGE2 309 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 XAGE5Q8WWM1 108 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 MIEF2Q96C03 454 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 TRIT1Q9H3H1 467 aaKnown RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 VRTNQ9H8Y1 702 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 TDP1Q9NUW8 608 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 APLP1P51693 650 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 RALGDSQ12967 914 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 KRR1Q13601 381 aaKnown RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 RNF44Q7L0R7 432 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SFRP1Q8N474 314 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 CNTD1Q8N815 330 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 LCN9Q8WX39 176 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 MCCC1Q96RQ3 725 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 KLHL1Q9NR64 748 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SEMA3GQ9NS98 782 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 EXD2Q9NVH0 621 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 DDX18Q9NVP1 670 aaKnown RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ADAM30Q9UKF2 790 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 N6AMT1Q9Y5N5 214 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 NEMP2A6NFY4 417 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 TRIM24O15164 1050 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 FFAR2O15552 330 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF623O75123 536 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 C8GP07360 202 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 GNAZP19086 355 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 STX4Q12846 297 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ATP13A5Q4VNC0 1218 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 RFTN2Q52LD8 501 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SLC9A4Q6AI14 798 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 GLYATQ6IB77 296 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PAQR3Q6TCH7 311 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 RALGPS2Q86X27 583 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PROSER1Q86XN7 944 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 TBC1D21Q8IYX1 336 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 UNC5BQ8IZJ1 945 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PQLC1Q8N2U9 271 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PNPT1Q8TCS8 783 aaKnown RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ADAMTS15Q8TE58 950 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 KLK6Q92876 244 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF358Q9NW07 568 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ATP6V1HQ9UI12 483 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SCAMP1O15126 338 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 GALTP07902 379 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SLC10A3P09131 477 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 MAGEA11P43364 429 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SPIBQ01892 262 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PTSQ03393 145 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 GRSF1Q12849 480 aaKnown RBP eCLIP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 BNIP1Q12981 228 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 PAFAH1B3Q15102 231 aaKnown RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 TIMM50Q3ZCQ8 353 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 ZNF514Q96K75 400 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 C6orf62Q9GZU0 229 aaPredicted RBP11.16□□□□□ -0.62
USP6NL-201ENST00000277575 LMAN2LQ9H0V9 348 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 SLC17A6Q9P2U8 582 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 IKZF3Q9UKT9 509 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 INSL5Q9Y5Q6 135 aa11.16□□□□□ -0.62
USP6NL-201ENST00000277575 CHURC1-FNTBB4DL54 471 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 GTPBP1O00178 669 aaKnown RBP11.15□□□□□ -0.62
USP6NL-201ENST00000277575 WNT9AO14904 365 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 NIPSNAP2O75323 286 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 TM7SF2O76062 418 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 FGF18O76093 207 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 MED26O95402 600 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 CDH5P33151 784 aaPredicted RBP11.15□□□□□ -0.62
USP6NL-201ENST00000277575 CHN2P52757 468 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 LDLRAP1Q5SW96 308 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 DEF8Q6ZN54 512 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 COMMD2Q86X83 199 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 HDDC3Q8N4P3 179 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 SNRNP27Q8WVK2 155 aaKnown RBP11.15□□□□□ -0.62
USP6NL-201ENST00000277575 ADI1Q9BV57 179 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 OR2AG1Q9H205 316 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 DNAJB4Q9UDY4 337 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 PCDHGA11Q9Y5H2 935 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 U3KQV3 271 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 NPHS1O60500 1241 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 CCNYL3P0C7X3 344 aa11.15□□□□□ -0.62
USP6NL-201ENST00000277575 GATMP50440 423 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms