RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 DPEP2Q9H4A9 486 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 GRIN2DO15399 1336 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 PGRMC2O15173 223 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 MATN3O15232 486 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 KELP23276 732 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 IL12AP29459 219 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 LIPEQ05469 1076 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 ZNF433Q8N7K0 673 aaPredicted RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 LRRC57Q8N9N7 239 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 NLGN2Q8NFZ4 835 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 WDR60Q8WVS4 1066 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 SNX27Q96L92 541 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 OAS3Q9Y6K5 1087 aaKnown RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 C2CD4BA6NLJ0 364 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 DUSP11O75319 330 aaKnown RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 PPIBP23284 216 aaKnown RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 YBEYP58557 167 aaPredicted RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 KLF1Q13351 362 aaPredicted RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 GTF2H2Q13888 395 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 SNAPC1Q16533 368 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 GTF2H2CQ6P1K8 395 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 IKBIPQ70UQ0 350 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 ANKRD23Q86SG2 305 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 HNRNPABQ99729 332 aaKnown RBP11.37□□□□□ -0.59
USP53-201ENST00000274030 ACBD6Q9BR61 282 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 CDADC1Q9BWV3 514 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 SLC17A6Q9P2U8 582 aa11.37□□□□□ -0.59
USP53-201ENST00000274030 OR1F1O43749 312 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 FKBP1BP68106 108 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 POU5F1Q01860 360 aaKnown RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 TCEAL5Q5H9L2 206 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 AAGABQ6PD74 315 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 PCDH19Q8TAB3 1148 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 HEXDCQ8WVB3 486 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 FAR1Q8WVX9 515 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 SCLYQ96I15 445 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 KLHL32Q96NJ5 620 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 XPNPEP1Q9NQW7 623 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 DUS2Q9NX74 493 aaKnown RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 MIOSQ9NXC5 875 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 UBE2QL1A1L167 161 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 TCAF2A6NFQ2 919 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 SRRM3A6NNA2 597 aaPredicted RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 FAM91A1Q658Y4 838 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 CXorf57Q6NSI4 855 aaKnown RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 GALNT18Q6P9A2 607 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 FOXR2Q6PJQ5 311 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 RTL4Q6ZR62 310 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 TAF8Q7Z7C8 310 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 CPA6Q8N4T0 437 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 DBF4BQ8NFT6 615 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 FAM110BQ8TC76 370 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 PRRG4Q9BZD6 226 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 HMGXB4Q9UGU5 601 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 GNEQ9Y223 722 aaKnown RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 UGT1A9O60656 530 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 HCN1O60741 890 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 CHRM5P08912 532 aaPredicted RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 ACRP10323 421 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 LAMP2P13473 410 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 IGFBP5P24593 272 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 L1CAMP32004 1257 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 LGALS3BPQ08380 585 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 SMARCB1Q12824 385 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 LIN54Q6MZP7 749 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 ZYG11AQ6WRX3 759 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 GALNT13Q8IUC8 556 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 OR2T34Q8NGX1 318 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 OR2T3Q8NH03 318 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 GATA5Q9BWX5 397 aaPredicted RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 MARCH7Q9H992 704 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 UGT1A7Q9HAW7 530 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 UGT1A10Q9HAW8 530 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 UGT1A8Q9HAW9 530 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 ELOVL7A1L3X0 281 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 BBIP1A8MTZ0 92 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 UGT1A5P35504 534 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 MAPK12P53778 367 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 DAOAP59103 153 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 PPP2R2BQ00005 443 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 RALGPS1Q5JS13 557 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 TSTD2Q5T7W7 516 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 TMEM220Q6QAJ8 160 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 SLCO6A1Q86UG4 719 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 TRIM63Q969Q1 353 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 GPN3Q9UHW5 284 aaPredicted RBP11.36□□□□□ -0.59
USP53-201ENST00000274030 ARL5AQ9Y689 179 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 hCG_2039718K7EN88 272 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 PIP5K1BO14986 540 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 ADAMTS3O15072 1205 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 SEPT4O43236 478 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 COL6A2P12110 1019 aa11.36□□□□□ -0.59
USP53-201ENST00000274030 CAPGP40121 348 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms