RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 COQ6Q9Y2Z9 468 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 SYNDIG1LA6NDD5 238 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 PRR5-ARHGAP8B1AHC4 643 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 ALDOAP04075 364 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 ABCB1P08183 1280 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 ARHGAP8P85298 464 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 LCP2Q13094 533 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 TCHHL1Q5QJ38 904 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 CAPN13Q6MZZ7 669 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 CD300LGQ6UXG3 332 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 PPP3R2Q96LZ3 170 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 DNAJC11Q9NVH1 559 aa14.31□□□□□ -0.12
PDLIM2-201ENST00000265810 RASGRP1O95267 797 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 AMD1P17707 334 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 ETV3P41162 512 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 SGSHP51688 502 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 CYP51A1Q16850 503 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 GPRC6AQ5T6X5 926 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 C1orf53Q5VUE5 145 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 STEAP4Q687X5 459 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 KDELC1Q6UW63 502 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 KRT78Q8N1N4 520 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 GPR156Q8NFN8 814 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 EEF1AKMT1Q8WVE0 214 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 MYLIPQ8WY64 445 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 SPACA6W5XKT8 324 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 ZCWPW2A0A1B0GU75 182 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 TGDSO95455 350 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 GRIA2P42262 883 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 RGRP47804 291 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 HK2P52789 917 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 TGM3Q08188 693 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 ELAVL3Q14576 367 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 LIMS2Q7Z4I7 341 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 GFM2Q969S9 779 aaKnown RBP14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 NECTIN4Q96NY8 510 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 CDC7O00311 574 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 CASQ2O14958 399 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 ATP1B2P14415 290 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 S100A3P33764 101 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 RCN1Q15293 331 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 UBE2E3Q969T4 207 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 PRICKLE1Q96MT3 831 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 GBP5Q96PP8 586 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 CEP44Q9C0F1 390 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 WDR26Q9H7D7 661 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 YY1AP1Q9H869 796 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 CAPN10Q9HC96 672 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 OXSMQ9NWU1 459 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 SLC27A6Q9Y2P4 619 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 SPO11Q9Y5K1 396 aa14.3□□□□□ -0.12
PDLIM2-201ENST00000265810 GJB3O75712 270 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 COX4I1P13073 169 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 CCND1P24385 295 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 CXCR2P25025 360 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 HLA-FP30511 346 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 SLC18A1P54219 525 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 NFATC2Q13469 925 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 CYS1Q717R9 158 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 NXPE1Q8N323 547 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 OR10G6Q8NH81 332 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 PEX13Q92968 403 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 EME1Q96AY2 570 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 DLX3O60479 287 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 PKNOX1P55347 436 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 MCCD1P59942 119 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TMPRSS11BQ86T26 416 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 AMZ2Q86W34 360 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TCAIMQ8N3R3 496 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 LRIG1Q96JA1 1093 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 RANBP9Q96S59 729 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 OSBPL6Q9BZF3 934 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TRIM45Q9H8W5 580 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 LIMD1Q9UGP4 676 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 PACSIN3Q9UKS6 424 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TYROBPO43914 113 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 OR4F21O95013 312 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 PRAMEF12O95522 483 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 HOXD9P28356 352 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 HMGCLP35914 325 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 GMPRP36959 345 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 MAGEA6P43360 314 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 LEPRP48357 1165 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 DGKEP52429 567 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 ARF5P84085 180 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 SQLEQ14534 574 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 PSAPL1Q6NUJ1 521 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 CDHR3Q6ZTQ4 885 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 ERN2Q76MJ5 926 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TSPAN33Q86UF1 283 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TSTD1Q8NFU3 115 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 TWIST2Q8WVJ9 160 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 C19orf60Q96EN9 201 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 F5P12259 2224 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 KNL1Q8NG31 2342 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 RGSL1A5PLK6 1076 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 AGRPO00253 132 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 FPGTO14772 594 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 FFAR2O15552 330 aa14.29□□□□□ -0.12
PDLIM2-201ENST00000265810 ITM2AO43736 263 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms