RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 CCDC182A6NF36 153 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 LZTS3O60299 673 aaPredicted RBP16.13■□□□□ 0.17
GPC1-201ENST00000264039 MYCLP1P12525 358 aaPredicted RBP16.13■□□□□ 0.17
GPC1-201ENST00000264039 ADRA1BP35368 520 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 GEMP55040 296 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 PTPRCAPQ14761 206 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 PSMD5Q16401 504 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 TAZQ16635 292 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.13■□□□□ 0.17
GPC1-201ENST00000264039 FUNDC1Q8IVP5 155 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 AURKBQ96GD4 344 aaPredicted RBP16.13■□□□□ 0.17
GPC1-201ENST00000264039 CGREF1Q99674 301 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 PLSCR3Q9NRY6 295 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 NDFIP2Q9NV92 336 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 PDP1Q9P0J1 537 aaPredicted RBP16.13■□□□□ 0.17
GPC1-201ENST00000264039 MAP10Q9P2G4 905 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 MAGEL2Q9UJ55 1249 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 TRHDEQ9UKU6 1024 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 B3GNT3Q9Y2A9 372 aa16.13■□□□□ 0.17
GPC1-201ENST00000264039 TNFRSF10AO00220 468 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 TEX28O15482 410 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 LRATO95237 230 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 CNPP09543 421 aaKnown RBP16.12■□□□□ 0.17
GPC1-201ENST00000264039 PIGAP37287 484 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 SH3BP2P78314 561 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 CLDN10P78369 228 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 IL18R1Q13478 541 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 RAPSNQ13702 412 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 SCN4BQ8IWT1 228 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 PHACTR4Q8IZ21 702 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 TCAIMQ8N3R3 496 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 TRNT1Q96Q11 434 aaKnown RBP16.12■□□□□ 0.17
GPC1-201ENST00000264039 DPY30Q9C005 99 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 MAT2BQ9NZL9 334 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 TESMINQ9Y4I5 508 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 EFNA1P20827 205 aaPredicted RBP16.12■□□□□ 0.17
GPC1-201ENST00000264039 MAGEA3P43357 314 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 HIST2H2ACQ16777 129 aaPredicted RBP16.12■□□□□ 0.17
GPC1-201ENST00000264039 CACHD1Q5VU97 1274 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 ZNF517Q6ZMY9 492 aaPredicted RBP16.12■□□□□ 0.17
GPC1-201ENST00000264039 HFE2Q6ZVN8 426 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 ADAMTS16Q8TE57 1224 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 ANKRD49Q8WVL7 239 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 TSPAN18Q96SJ8 248 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 CASS4Q9NQ75 786 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 MOXD2PA6NHM9 499 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 PLA2G6O60733 806 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 TCF3P15923 654 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 PROZP22891 400 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 GABRB3P28472 473 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 GALNT10Q86SR1 603 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 ELMOD1Q8N336 334 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 KRT84Q9NSB2 600 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 PIGVQ9NUD9 493 aa16.12■□□□□ 0.17
GPC1-201ENST00000264039 SAGE2PA6NJ88 616 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 JRKO75564 520 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 SEC14L2O76054 403 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 GLP2RO95838 553 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 PTGS2P35354 604 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CD86P42081 329 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CYP4F8P98187 520 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CLCA4Q14CN2 919 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 TLK2Q86UE8 772 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CHDHQ8NE62 594 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 SPPL2AQ8TCT8 520 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 SLC22A17Q8WUG5 538 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 MLPHQ9BV36 600 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 GPN2Q9H9Y4 310 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 MPP6Q9NZW5 540 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 PCDHGA11Q9Y5H2 935 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 NOS1APO75052 506 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 OR4F21O95013 312 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 ITGBL1O95965 494 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 NTRK1P04629 796 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 UMPSP11172 480 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 NOS2P35228 1153 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CASP3P42574 277 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 YBX1P67809 324 aaKnown RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 FCHO2Q0JRZ9 810 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 E2F2Q14209 437 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 SLC10A6Q3KNW5 377 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 LRIT3Q3SXY7 679 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 SOWAHCQ53LP3 525 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 PROSER1Q86XN7 944 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 TTC39CQ8N584 583 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 OR52J3Q8NH60 311 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 TEKT5Q96M29 485 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 LRRC3Q9BY71 257 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 THG1LQ9NWX6 298 aaKnown RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 CD300AQ9UGN4 299 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 POLG2Q9UHN1 485 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 N6AMT1Q9Y5N5 214 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 PRMT5O14744 637 aaPredicted RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 ENDOD1O94919 500 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 SNX4O95219 450 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 CPSF4O95639 269 aaKnown RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 GOT2P00505 430 aaKnown RBP16.11■□□□□ 0.17
GPC1-201ENST00000264039 POU2F1P14859 743 aa16.11■□□□□ 0.17
GPC1-201ENST00000264039 WNT3AP56704 352 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms