RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 TGDSO95455 350 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 MSH3P20585 1137 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 ARRB2P32121 409 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 SF3A3Q12874 501 aaKnown RBP eCLIP22.58■■□□□ 1.211e-6■■■■□ 22.8
SMARCB1-201ENST00000263121 AGERQ15109 404 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 ZSCAN26Q16670 478 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 TMEM92Q6UXU6 159 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 ZNF771Q7L3S4 317 aaPredicted RBP22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 PHYKPLQ8IUZ5 450 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 CCDC126Q96EE4 140 aa22.58■■□□□ 1.21
SMARCB1-201ENST00000263121 NEMP2A6NFY4 417 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 IGLON5A6NGN9 336 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 MAGEC1O60732 1142 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 KERAO60938 352 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 TM7SF2O76062 418 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 PCDH8O95206 1070 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 ABCE1P61221 599 aaKnown RBP22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 NFKB2Q00653 900 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 ASPHQ12797 758 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 OVGP1Q12889 678 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 CRY1Q16526 586 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 ATG14Q6ZNE5 492 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 DET1Q7L5Y6 550 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 STAG3L4Q8TBR4 150 aa22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 NDRG2Q9UN36 371 aaKnown RBP22.58■■□□□ 1.2
SMARCB1-201ENST00000263121 PIKFYVEQ9Y2I7 2098 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 NPEPPSL1A6NEC2 478 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 CDC7O00311 574 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 LYPLA1O75608 230 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 IPO13O94829 963 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 GPR1P46091 355 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 TSNQ15631 228 aaKnown RBP22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 ZNF648Q5T619 568 aaPredicted RBP22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 RAET1GQ6H3X3 334 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 SLC22A9Q8IVM8 553 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 ZNF687Q8N1G0 1237 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 GANCQ8TET4 914 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 SIPA1Q96FS4 1042 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 MRGPRX1Q96LB2 322 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 SORT1Q99523 831 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 KLHL14Q9P2G3 628 aa22.57■■□□□ 1.2
SMARCB1-201ENST00000263121 ERICH4A6NGS2 130 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 BTN3A1O00481 513 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 INPP4BO15327 924 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 TROVE2P10155 538 aaKnown RBP eCLIP22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 MTHFD2P13995 350 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 DGKAP23743 735 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 CCR7P32248 378 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 RGS4P49798 205 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 NAGLUP54802 743 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 TTLL9Q3SXZ7 439 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 TTC31Q49AM3 519 aaPredicted RBP22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 ACSBG2Q5FVE4 666 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 SEL1L3Q68CR1 1132 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 ZNF852Q6ZMS4 543 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 CRLF3Q8IUI8 442 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 ADHFE1Q8IWW8 467 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 FUBP1Q96AE4 644 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 FZD4Q9ULV1 537 aa22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 ZFR2Q9UPR6 939 aaKnown RBP22.56■■□□□ 1.2
SMARCB1-201ENST00000263121 QSOX1O00391 747 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 SMIM24O75264 130 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 AOAHP28039 575 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 ADPRHP54922 357 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 PRKCQQ04759 706 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 TMEM115Q12893 351 aaPredicted RBP22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 GBX1Q14549 363 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 HABP4Q5JVS0 413 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 USP30Q70CQ3 517 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 PIWIL4Q7Z3Z4 852 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 RASGEF1AQ8N9B8 481 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 THOC1Q96FV9 657 aaKnown RBP22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 TRIM55Q9BYV6 548 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 DRC3Q9H069 523 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 NPHS2Q9NP85 383 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 PRDM6Q9NQX0 595 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 RNF112Q9ULX5 631 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 TPBGLP0DKB5 382 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 CBSLP0DN79 551 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 CHRNB1P11230 501 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 CBSP35520 551 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 ADAMTSL4Q6UY14 1074 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 TRIM67Q6ZTA4 783 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 OR14C36Q8NHC7 312 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 TMEM237Q96Q45 408 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 CYP4F12Q9HCS2 524 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 NCKIPSDQ9NZQ3 722 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 CA14Q9ULX7 337 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 ARL2BPQ9Y2Y0 163 aa22.55■■□□□ 1.2
SMARCB1-201ENST00000263121 UBXN8O00124 270 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 EIF3FO00303 357 aaPredicted RBP22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 NPHS1O60500 1241 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 NDUFV2P19404 249 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 RPS21P63220 83 aaKnown RBP22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 ZP2Q05996 745 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 RCN2Q14257 317 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 WSCD2Q2TBF2 565 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 TMEM259Q4ZIN3 620 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 KIAA1161Q6NSJ0 714 aa22.54■■□□□ 1.2
SMARCB1-201ENST00000263121 KBTBD6Q86V97 674 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms