RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SBF1O95248 1867 aa14.83□□□□□ -0.03
XRCC1-201ENST00000262887 M0QX08 132 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 TNPO2O14787 897 aaKnown RBP14.83□□□□□ -0.04
XRCC1-201ENST00000262887 DYRK3O43781 588 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SLC22A3O75751 556 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 DLGAP3O95886 979 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SLC26A3P40879 764 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 POLR2JP52435 117 aaKnown RBP14.83□□□□□ -0.04
XRCC1-201ENST00000262887 ISL1P61371 349 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SULT1C3Q6IMI6 304 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 RANBP10Q6VN20 620 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 RNF19BQ6ZMZ0 732 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 GET4Q7L5D6 327 aaPredicted RBP14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SPATA19Q7Z5L4 167 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 OSTM1Q86WC4 334 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 DTWD1Q8N5C7 304 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 PJA1Q8NG27 643 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 OR6P1Q8NGX9 317 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SH3RF2Q8TEC5 729 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 EDEM1Q92611 657 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 CEP295NLQ96MC4 621 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 BTBD2Q9BX70 525 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 NEK6Q9HC98 313 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 AIG1Q9NVV5 245 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SLCO3A1Q9UIG8 710 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 PCDHGB1Q9Y5G3 927 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 PIRO00625 290 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SOCS7O14512 581 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 HLA-DQB2P05538 268 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 BAG6P46379 1132 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 ZFP36L2P47974 494 aaKnown RBP14.83□□□□□ -0.04
XRCC1-201ENST00000262887 ZNF135P52742 658 aaPredicted RBP14.83□□□□□ -0.04
XRCC1-201ENST00000262887 WDR45BQ5MNZ6 344 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 PAQR9Q6ZVX9 377 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 SAMD7Q7Z3H4 446 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 LRRC49Q8IUZ0 686 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 RNF34Q969K3 372 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 YIPF6Q96EC8 236 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 RGS18Q9NS28 235 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 RABL2AQ9UBK7 228 aaPredicted RBP14.83□□□□□ -0.04
XRCC1-201ENST00000262887 CRYL1Q9Y2S2 319 aa14.83□□□□□ -0.04
XRCC1-201ENST00000262887 ZSWIM8A7E2V4 1837 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 LOC100130705A0A1B0GUX0 176 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 TPPPO94811 219 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 WISP3O95389 354 aaPredicted RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 ANXA6P08133 673 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 USP17L7P0C7H9 530 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 CCDC159P0C7I6 412 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 CD1DP15813 335 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 TAF6P49848 677 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 PPP2R2BQ00005 443 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 GALNT13Q8IUC8 556 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 HS3ST5Q8IZT8 346 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 LGI2Q8N0V4 545 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 POC5Q8NA72 575 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 PABPC5Q96DU9 382 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 PGAP3Q96FM1 320 aaPredicted RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 ZNF300Q96RE9 604 aaPredicted RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 RBM4BQ9BQ04 359 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 RBM4Q9BWF3 364 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 SPATC1LQ9H0A9 340 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 TRIT1Q9H3H1 467 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 GOLGA2P5Q9HBQ8 144 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 EXD2Q9NVH0 621 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 RBM22Q9NW64 420 aaKnown RBP eCLIP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 COMMD8Q9NX08 183 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 INTS6Q9UL03 887 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 A0A1B0GTL3 188 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 LOC105371267A0A1B0GV96 52 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 FAM92AA1XBS5 289 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 CCL22O00626 93 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 KATNA1O75449 491 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 RECQL4O94761 1208 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 KCNK2O95069 426 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 NDST3O95803 873 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 AKAP5P24588 427 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 COPZ1P61923 177 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 NCS1P62166 190 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 GRIK2Q13002 908 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 ZNF691Q5VV52 312 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 SIGIRRQ6IA17 410 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 TAS2R42Q7RTR8 314 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 HID1Q8IV36 788 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 MCOLN3Q8TDD5 553 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 CLSTN3Q9BQT9 956 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 CENPOQ9BU64 300 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 SLIRPQ9GZT3 109 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 SIK2Q9H0K1 926 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 NXF3Q9H4D5 531 aaKnown RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 SEMA4BQ9NPR2 832 aaPredicted RBP14.82□□□□□ -0.04
XRCC1-201ENST00000262887 USE1Q9NZ43 259 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 PCDHGA3Q9Y5H0 932 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 MIA3Q5JRA6 1907 aa14.82□□□□□ -0.04
XRCC1-201ENST00000262887 GNGT2O14610 69 aa14.81□□□□□ -0.04
XRCC1-201ENST00000262887 MATN3O15232 486 aa14.81□□□□□ -0.04
XRCC1-201ENST00000262887 XPNPEP2O43895 674 aa14.81□□□□□ -0.04
XRCC1-201ENST00000262887 CNTN5O94779 1100 aa14.81□□□□□ -0.04
XRCC1-201ENST00000262887 F9P00740 461 aa14.81□□□□□ -0.04
XRCC1-201ENST00000262887 CST1P01037 141 aa14.81□□□□□ -0.04
XRCC1-201ENST00000262887 CD4P01730 458 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms