RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 RAB44Q7Z6P3 723 aaPredicted RBP22.37■■□□□ 1.17
MCF2L-201ENST00000261963 RETREG3Q86VR2 466 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 DENND1CQ8IV53 801 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 C2orf15Q8WU43 125 aaKnown RBP22.37■■□□□ 1.17
MCF2L-201ENST00000261963 C1orf50Q9BV19 199 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 SRRDQ9UH36 339 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 KERAO60938 352 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 KLKB1P03952 638 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 C6orf10Q5SRN2 563 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 IRAK1BP1Q5VVH5 260 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 LHX8Q68G74 356 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 AFTPHQ6ULP2 937 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 ERMP1Q7Z2K6 904 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 GLT6D1Q7Z4J2 308 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 CBR4Q8N4T8 237 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 ACDQ96AP0 544 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 RMDN1Q96DB5 314 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 TSEN34Q9BSV6 310 aaKnown RBP22.37■■□□□ 1.17
MCF2L-201ENST00000261963 DERL2Q9GZP9 239 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 CROTQ9UKG9 612 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 TMEM98Q9Y2Y6 226 aa22.37■■□□□ 1.17
MCF2L-201ENST00000261963 ZNF839A8K0R7 811 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 GFAPP14136 432 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 PSMA3P25788 255 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 SLC11A2P49281 568 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 CDKN1CP49918 316 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 NFATC3Q12968 1075 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 GRB7Q14451 532 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 TAF1AQ15573 450 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 TRIM16LQ309B1 348 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 SLC39A3Q9BRY0 314 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 CROCCQ5TZA2 2017 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 OXSR1O95747 527 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 ZNF182P17025 639 aaPredicted RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 MAP4P27816 1152 aaKnown RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 STX1BP61266 288 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 ELAVL2Q12926 359 aaKnown RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 INTS11Q5TA45 600 aaKnown RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 SLC2A7Q6PXP3 512 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 KCTD8Q6ZWB6 473 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 FBXO22Q8NEZ5 403 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 CDK5RAP1Q96SZ6 601 aaKnown RBP22.36■■□□□ 1.17
MCF2L-201ENST00000261963 ARMC1Q9NVT9 282 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 TAS2R13Q9NYV9 303 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 GALPQ9UBC7 116 aa22.36■■□□□ 1.17
MCF2L-201ENST00000261963 LCHNA4D1U4 455 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 ZNF840PA6NDX5 716 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 ARVCFO00192 962 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 DLGAP1O14490 977 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 COCHO43405 550 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 SRP72O76094 671 aaKnown RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 F11P03951 625 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 CCNA2P20248 432 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 EEF1DP29692 281 aaKnown RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 TSNQ15631 228 aaKnown RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 FBXO48Q5FWF7 155 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 DHFR2Q86XF0 187 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 CRIPAKQ8N1N5 446 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 STAG3L4Q8TBR4 150 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 RETREG1Q9H6L5 497 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 SYTL2Q9HCH5 934 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 RIC8BQ9NVN3 520 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 HACD3Q9P035 362 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 GMPR2Q9P2T1 348 aaKnown RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 TET1Q8NFU7 2136 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 SUPT3HB4E1H0 165 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 KPNA4O00629 521 aaPredicted RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 RPL17P18621 184 aaKnown RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 JAK1P23458 1154 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 CD300CQ08708 224 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 SLC36A3Q495N2 470 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 ZC3H7AQ8IWR0 971 aaKnown RBP22.35■■□□□ 1.17
MCF2L-201ENST00000261963 PIANPQ8IYJ0 282 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 TAMM41Q96BW9 452 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 GPR21Q99679 349 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 SLC30A3Q99726 388 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 NACA2Q9H009 215 aa22.35■■□□□ 1.17
MCF2L-201ENST00000261963 A0A0J9YYE9 177 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 CDC7O00311 574 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 CLDN11O75508 207 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 ECI2O75521 394 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 HSPA8P11142 646 aaKnown RBP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 SLC7A2P52569 658 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 CLCQ05315 142 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 GRSF1Q12849 480 aaKnown RBP eCLIP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 GEN1Q17RS7 908 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 SAMD4BQ5PRF9 694 aaKnown RBP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 FAM117BQ6P1L5 589 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 GALNT18Q6P9A2 607 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 ZBTB46Q86UZ6 589 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 CANT1Q8WVQ1 401 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 CNDP2Q96KP4 475 aaKnown RBP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 SCUBE2Q9NQ36 999 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 GKN1Q9NS71 199 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 AGO1Q9UL18 857 aaKnown RBP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 RNF112Q9ULX5 631 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 ARIH1Q9Y4X5 557 aaPredicted RBP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 PCDHGC4Q9Y5F7 938 aa22.34■■□□□ 1.17
MCF2L-201ENST00000261963 OAS3Q9Y6K5 1087 aaKnown RBP22.34■■□□□ 1.17
MCF2L-201ENST00000261963 C1orf232A0A0U1RR37 186 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms