RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 YBX1P67809 324 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 CYP4F8P98187 520 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 KCNAB2Q13303 367 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 OR4D1Q15615 310 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 DGUOKQ16854 277 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 SIRPB2Q5JXA9 342 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ARMC4Q5T2S8 1044 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 ZNF648Q5T619 568 aaPredicted RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 UGT3A1Q6NUS8 523 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 MBOAT1Q6ZNC8 495 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TBC1D21Q8IYX1 336 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 EEF1AKMT1Q8WVE0 214 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 HNRNPABQ99729 332 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 SH3GL1Q99961 368 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 POLR1EQ9GZS1 481 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 VTA1Q9NP79 307 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 MTRRQ9UBK8 725 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 SUCOQ9UBS9 1254 aaKnown RBP10.01□□□□□ -0.81
PALB2-201ENST00000261584 LRFN2Q9ULH4 789 aa10.01□□□□□ -0.81
PALB2-201ENST00000261584 TNKS1BP1Q9C0C2 1729 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 PDZK1P1A8MUH7 402 aa10□□□□□ -0.81
PALB2-201ENST00000261584 BCKDKO14874 412 aa10□□□□□ -0.81
PALB2-201ENST00000261584 FAM189A1O60320 539 aa10□□□□□ -0.81
PALB2-201ENST00000261584 CNOT3O75175 753 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 HIST1H2AGP0C0S8 130 aaPredicted RBP10□□□□□ -0.81
PALB2-201ENST00000261584 COL6A2P12110 1019 aa10□□□□□ -0.81
PALB2-201ENST00000261584 RPL17P18621 184 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 HIST1H2ADP20671 130 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TGFBR1P36897 503 aa10□□□□□ -0.81
PALB2-201ENST00000261584 MASP1P48740 699 aa10□□□□□ -0.81
PALB2-201ENST00000261584 PRIM2P49643 509 aa10□□□□□ -0.81
PALB2-201ENST00000261584 BCAP31P51572 246 aa10□□□□□ -0.81
PALB2-201ENST00000261584 RHOAP61586 193 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ZXDBP98169 803 aa10□□□□□ -0.81
PALB2-201ENST00000261584 UNC50Q53HI1 259 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TTC23Q5W5X9 447 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HMBOX1Q6NT76 420 aa10□□□□□ -0.81
PALB2-201ENST00000261584 GPR180Q86V85 440 aa10□□□□□ -0.81
PALB2-201ENST00000261584 FAM217AQ8IXS0 508 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HIST1H2AHQ96KK5 128 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TEX37Q96LM6 180 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HIST1H2AJQ99878 128 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HEPHQ9BQS7 1158 aa10□□□□□ -0.81
PALB2-201ENST00000261584 H2AFJQ9BTM1 129 aa10□□□□□ -0.81
PALB2-201ENST00000261584 USE1Q9NZ43 259 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TEKT2Q9UIF3 430 aa10□□□□□ -0.81
PALB2-201ENST00000261584 CDH9Q9ULB4 789 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TESMINQ9Y4I5 508 aa10□□□□□ -0.81
PALB2-201ENST00000261584 DDX60Q8IY21 1712 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 PRSS51A0A1B0GVH4 220 aa10□□□□□ -0.81
PALB2-201ENST00000261584 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
PALB2-201ENST00000261584 DCLK1O15075 740 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ULK1O75385 1050 aa10□□□□□ -0.81
PALB2-201ENST00000261584 GLUD1P00367 558 aa10□□□□□ -0.81
PALB2-201ENST00000261584 GBAP04062 536 aa10□□□□□ -0.81
PALB2-201ENST00000261584 RHOCP08134 193 aa10□□□□□ -0.81
PALB2-201ENST00000261584 IFI30P13284 250 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HOXA11P31270 313 aaPredicted RBP10□□□□□ -0.81
PALB2-201ENST00000261584 RELAQ04206 551 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TMEM53Q6P2H8 277 aa10□□□□□ -0.81
PALB2-201ENST00000261584 BTLAQ7Z6A9 289 aa10□□□□□ -0.81
PALB2-201ENST00000261584 RPL3LQ92901 407 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 MTERF3Q96E29 417 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HOPXQ9BPY8 73 aaPredicted RBP10□□□□□ -0.81
PALB2-201ENST00000261584 YIPF2Q9BWQ6 316 aa10□□□□□ -0.81
PALB2-201ENST00000261584 NUAK2Q9H093 628 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ASB8Q9H765 288 aa10□□□□□ -0.81
PALB2-201ENST00000261584 MAGEE1Q9HCI5 957 aa10□□□□□ -0.81
PALB2-201ENST00000261584 SLC38A7Q9NVC3 462 aa10□□□□□ -0.81
PALB2-201ENST00000261584 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10□□□□□ -0.81
PALB2-201ENST00000261584 C14orf119Q9NWQ9 140 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ZDHHC7Q9NXF8 308 aa10□□□□□ -0.81
PALB2-201ENST00000261584 MOSPD1Q9UJG1 213 aa10□□□□□ -0.81
PALB2-201ENST00000261584 NRCAMQ92823 1304 aa10□□□□□ -0.81
PALB2-201ENST00000261584 A0A0D9SEW6 157 aa10□□□□□ -0.81
PALB2-201ENST00000261584 A0A1B0GTL3 188 aa10□□□□□ -0.81
PALB2-201ENST00000261584 MATN3O15232 486 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TPST2O60704 377 aa10□□□□□ -0.81
PALB2-201ENST00000261584 NDUFS2O75306 463 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ALDH1A2O94788 518 aa10□□□□□ -0.81
PALB2-201ENST00000261584 IMPDH1P20839 514 aa10□□□□□ -0.81
PALB2-201ENST00000261584 LCP2Q13094 533 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ACAP2Q15057 778 aa10□□□□□ -0.81
PALB2-201ENST00000261584 SMN1Q16637 294 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 SPANXN4Q5MJ08 99 aa10□□□□□ -0.81
PALB2-201ENST00000261584 ATXN7L2Q5T6C5 722 aaPredicted RBP10□□□□□ -0.81
PALB2-201ENST00000261584 FAM45BPQ6NSW5 357 aa10□□□□□ -0.81
PALB2-201ENST00000261584 HMGN2P46Q86SG4 172 aa10□□□□□ -0.81
PALB2-201ENST00000261584 DTX3Q8N9I9 347 aa10□□□□□ -0.81
PALB2-201ENST00000261584 FAM45AQ8TCE6 357 aa10□□□□□ -0.81
PALB2-201ENST00000261584 UGT2B28Q9BY64 529 aa10□□□□□ -0.81
PALB2-201ENST00000261584 RPF2Q9H7B2 306 aaKnown RBP10□□□□□ -0.81
PALB2-201ENST00000261584 FAM105AQ9NUU6 356 aa10□□□□□ -0.81
PALB2-201ENST00000261584 TOR4AQ9NXH8 423 aa10□□□□□ -0.81
PALB2-201ENST00000261584 CORINQ9Y5Q5 1042 aa10□□□□□ -0.81
PALB2-201ENST00000261584 EVPLQ92817 2033 aa9.99□□□□□ -0.81
PALB2-201ENST00000261584 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.99□□□□□ -0.81
PALB2-201ENST00000261584 H3BN98 237 aa9.99□□□□□ -0.81
PALB2-201ENST00000261584 UBFD1O14562 309 aaKnown RBP9.99□□□□□ -0.81
PALB2-201ENST00000261584 FUCA1P04066 466 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms