RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 LCN8Q6JVE9 175 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 LGI2Q8N0V4 545 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 FBXO32Q969P5 355 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 L3HYPDHQ96EM0 354 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 UHRF1Q96T88 793 aaPredicted RBP13.09□□□□□ -0.31
PGBD1-201ENST00000259883 EGFL8Q99944 293 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 TRMOQ9BU70 441 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
PGBD1-201ENST00000259883 SH3GLB1Q9Y371 365 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 KRT87PA6NCN2 255 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 MYO1GB0I1T2 1018 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 CHRNB3Q05901 458 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 BNIP2Q12982 314 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 DNASE1L3Q13609 305 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 SPIDRQ14159 915 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 KANK2Q63ZY3 851 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 LETMD1Q6P1Q0 360 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 CNIH3Q8TBE1 160 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
PGBD1-201ENST00000259883 RSPH1Q8WYR4 309 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 FAM162AQ96A26 154 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 ACDQ96AP0 544 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 FEM1CQ96JP0 617 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 ACBD6Q9BR61 282 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 BDH2Q9BUT1 245 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 SACM1LQ9NTJ5 587 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 FAIMQ9NVQ4 179 aa13.09□□□□□ -0.31
PGBD1-201ENST00000259883 TRMT6Q9UJA5 497 aaKnown RBP13.09□□□□□ -0.31
PGBD1-201ENST00000259883 PDCD11Q14690 1871 aaKnown RBP13.09□□□□□ -0.31
PGBD1-201ENST00000259883 RBM47A0AV96 593 aaKnown RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 INMTO95050 263 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 LRATO95237 230 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 CST1P01037 141 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 PSMD8P48556 350 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 HSPA7P48741 367 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 ARSFP54793 590 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 CDC42EP1Q00587 391 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 BRMS1LQ5PSV4 323 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 C6orf136Q5SQH8 315 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 INTS11Q5TA45 600 aaKnown RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 GPRIN3Q6ZVF9 776 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 GPSM1Q86YR5 675 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 KRTCAP2Q8N6L1 136 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 SKA2Q8WVK7 121 aaPredicted RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 FUBP1Q96AE4 644 aaKnown RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 SERPINB11Q96P15 392 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 RHNO1Q9BSD3 238 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 AARSD1Q9BTE6 412 aaKnown RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 POLR1EQ9GZS1 481 aaKnown RBP13.08□□□□□ -0.31
PGBD1-201ENST00000259883 MARCH2Q9P0N8 246 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 HCSTQ9UBK5 93 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 DAPK2Q9UIK4 370 aa13.08□□□□□ -0.31
PGBD1-201ENST00000259883 BBIP1A8MTZ0 92 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 A8MU76 341 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 CFAP99D6REC4 459 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 RPP40O75818 363 aaKnown RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 CAPNS1P04632 268 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 TGFBR1P36897 503 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 HK3P52790 923 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 TAF10Q12962 218 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 SPCS2Q15005 226 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 TRIM16LQ309B1 348 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 RFTN2Q52LD8 501 aaPredicted RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 C8orf82Q6P1X6 216 aaPredicted RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 CLDN19Q8N6F1 224 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 ZUFSPQ96AP4 578 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 PTPN18Q99952 460 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 MIR1-1HGQ9H1L0 117 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 CIDEBQ9UHD4 219 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 LEF1Q9UJU2 399 aaPredicted RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 PCDHGA8Q9Y5G5 932 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 SLC30A1Q9Y6M5 507 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 FTH1P02794 183 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 SERPINF2P08697 491 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 THRBP10828 461 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 HSD17B1P14061 328 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 FMO3P31513 532 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 EIF2B2P49770 351 aaKnown RBP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 STC1P52823 247 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 ERVPABLB-1P60509 514 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 IL5RAQ01344 420 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 GRB14Q14449 540 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 MBOAT1Q6ZNC8 495 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 ZDHHC13Q8IUH4 622 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 MFSD2AQ8NA29 543 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 PROKR1Q8TCW9 393 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.08□□□□□ -0.32
PGBD1-201ENST00000259883 COX4I2Q96KJ9 171 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 NSMCE3Q96MG7 304 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 BIRC8Q96P09 236 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 CSF3RQ99062 836 aa13.08□□□□□ -0.32
PGBD1-201ENST00000259883 IKZF5Q9H5V7 419 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms