RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ARRDC3Q96B67 414 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 FAM136AQ96C01 138 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 THOC1Q96FV9 657 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 USP36Q9P275 1121 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 GALPQ9UBC7 116 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 MBD1Q9UIS9 605 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 MID2Q9UJV3 735 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 SCML1Q9UN30 329 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 ATXN2Q99700 1313 aaKnown RBP17.27■□□□□ 0.36
SRSF1-201ENST00000258962 EML5Q05BV3 1969 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 OTOGLQ3ZCN5 2332 aa17.27■□□□□ 0.36
SRSF1-201ENST00000258962 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 GOLGA8CPA6NN73 597 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 SPINT1O43278 529 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 NIPSNAP2O75323 286 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 MYL2P10916 166 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ZNF37AP17032 561 aaPredicted RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ACRV1P26436 265 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 STX3Q13277 289 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ITIH4Q14624 930 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 FAM83EQ2M2I3 478 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 GPR33Q49SQ1 333 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 HSD11B1LQ7Z5J1 315 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 YTHDF3Q7Z739 585 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 TTC7BQ86TV6 843 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 MMAAQ8IVH4 418 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 TMEFF1Q8IYR6 380 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PIP4K2CQ8TBX8 421 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ZNF398Q8TD17 642 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 C7orf26Q96N11 449 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PLEKHG4BQ96PX9 1271 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 MRPL57Q9BQC6 102 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 BOCQ9BWV1 1114 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 CCDC68Q9H2F9 335 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 MRPL46Q9H2W6 279 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 NCKAP1Q9Y2A7 1128 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 OAS3Q9Y6K5 1087 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PIKFYVEQ9Y2I7 2098 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 VPS13AQ96RL7 3174 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ITM2AO43736 263 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ESR1P03372 595 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 SERPINE1P05121 402 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 RALBP11234 206 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 CD9P21926 228 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ITGB7P26010 798 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ARRB2P32121 409 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 MMP12P39900 470 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 KPNA2P52292 529 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 CREB5Q02930 508 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PDAP1Q13442 181 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ITGA9Q13797 1035 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ARHGEF7Q14155 803 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 CST6Q15828 149 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 AGAP9Q5VTM2 703 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ATG14Q6ZNE5 492 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 FAM124AQ86V42 546 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 NXPE1Q8N323 547 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 TOE1Q96GM8 510 aaKnown RBP17.26■□□□□ 0.35
SRSF1-201ENST00000258962 GPR21Q99679 349 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 SLC30A3Q99726 388 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ARRDC1-AS1Q9H2J1 176 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 OXSMQ9NWU1 459 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 TAS2R13Q9NYV9 303 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PKD2L2Q9NZM6 624 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 CRLS1Q9UJA2 301 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 ITM2BQ9Y287 266 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PCDHGA5Q9Y5G8 931 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 COMMD10Q9Y6G5 202 aa17.26■□□□□ 0.35
SRSF1-201ENST00000258962 PRMT5O14744 637 aaPredicted RBP17.25■□□□□ 0.35
SRSF1-201ENST00000258962 EPN2O95208 641 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 IGLV3-19P01714 112 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 XPAP23025 273 aaPredicted RBP17.25■□□□□ 0.35
SRSF1-201ENST00000258962 RPS3P23396 243 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■□□□□ 8.6
SRSF1-201ENST00000258962 ATP13A5Q4VNC0 1218 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 LYPLAL1Q5VWZ2 237 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 ZDHHC20Q5W0Z9 365 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 PAQR3Q6TCH7 311 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 NAPRTQ6XQN6 538 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 DEFB119Q8N690 84 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 GIMAP7Q8NHV1 300 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 PPP1R14CQ8TAE6 165 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 C10orf82Q8WW14 230 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 PTERQ96BW5 349 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 NPHS2Q9NP85 383 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 WSB2Q9NYS7 404 aaPredicted RBP17.25■□□□□ 0.35
SRSF1-201ENST00000258962 KLHL14Q9P2G3 628 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 CD84Q9UIB8 345 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 TMPRSS11EQ9UL52 423 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 ARL2BPQ9Y2Y0 163 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 PCDHB1Q9Y5F3 818 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 PRSS21Q9Y6M0 314 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 GON4LQ3T8J9 2241 aa17.25■□□□□ 0.35
SRSF1-201ENST00000258962 THADAQ6YHU6 1953 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 ZBTB14O43829 449 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 DLX3O60479 287 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 LRP3O75074 770 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 VPS26AO75436 327 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 LYPLA1O75608 230 aaPredicted RBP17.24■□□□□ 0.35
SRSF1-201ENST00000258962 TGDSO95455 350 aa17.24■□□□□ 0.35
SRSF1-201ENST00000258962 ADH1BP00325 375 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms