RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 MN1Q10571 1320 aaPredicted RBP18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 H7C0C1 242 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 AGTP01019 485 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 EPOP01588 193 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 AMD1P17707 334 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 IDSP22304 550 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 RBL1P28749 1068 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 SPAM1P38567 509 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 ATP5OP48047 213 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 LEPRP48357 1165 aaKnown RBP18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 SEPHS1P49903 392 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 GTF2H3Q13889 308 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 PPP2R5EQ16537 467 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 C11orf63Q6NUN7 778 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 ABRAXAS1Q6UWZ7 409 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 PRICKLE2Q7Z3G6 844 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 RBM41Q96IZ5 413 aaKnown RBP18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 C9orf72Q96LT7 481 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 TEFMQ96QE5 360 aaKnown RBP18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 VAT1Q99536 393 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 EPB41L1Q9H4G0 881 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 TRABDQ9H4I3 376 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 UCK1Q9HA47 277 aa18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 ZNF106Q9H2Y7 1883 aaKnown RBP18.69■□□□□ 0.58
TM6SF1-201ENST00000258909 GLYATL1P3A0A0U1RQE8 302 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 RCCD1A6NED2 376 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 POLR1CO15160 346 aaPredicted RBP18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 CAPN5O15484 640 aaPredicted RBP18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 ITGB6P18564 788 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 CTSCP53634 463 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 FOXM1Q08050 763 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 MPP3Q13368 585 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 OLIG2Q13516 323 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 GPR18Q14330 331 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 CCDC181Q5TID7 509 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 BBS12Q6ZW61 710 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 CCDC170Q8IYT3 715 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 NLGN4XQ8N0W4 816 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 RASGEF1AQ8N9B8 481 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 NLGN4YQ8NFZ3 816 aaPredicted RBP18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 RSC1A1Q92681 617 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 CXorf40BQ96DE9 158 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 FAM118BQ9BPY3 351 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 GORASP1Q9BQQ3 440 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 FSD1LQ9BXM9 530 aa18.68■□□□□ 0.58
TM6SF1-201ENST00000258909 MYO18BQ8IUG5 2567 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 LOC101059948A0A1B0GTJ6 334 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 MACROD2A1Z1Q3 448 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 SOWAHDA6NJG2 315 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 HACD1B0YJ81 288 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 KIF1CO43896 1103 aaKnown RBP18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 STK17BO94768 372 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 C9P02748 559 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 HLA-DPA1P20036 260 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 CYLC1P35663 651 aaPredicted RBP18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 SH3BP2P78314 561 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 NAT14Q8WUY8 206 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 APOL2Q9BQE5 337 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 FICDQ9BVA6 458 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 FAM117AQ9C073 453 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 SLC40A1Q9NP59 571 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 POT1Q9NUX5 634 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 SIDT1Q9NXL6 827 aaKnown RBP18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 HACD3Q9P035 362 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 TRHDEQ9UKU6 1024 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 PSMD13Q9UNM6 376 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 DUSP10Q9Y6W6 482 aa18.67■□□□□ 0.58
TM6SF1-201ENST00000258909 OR2AG2A6NM03 316 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 APOC4-APOC2K7ER74 178 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 GAPDHSO14556 408 aaPredicted RBP18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 NKX2-8O15522 239 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 POP7O75817 140 aaKnown RBP18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 RASSF9O75901 435 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 APOC2P02655 101 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 VCLP18206 1134 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 GPRC6AQ5T6X5 926 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 AGAP9Q5VTM2 703 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 TMEM220Q6QAJ8 160 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 XKR5Q6UX68 686 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 WASH2PQ6VEQ5 465 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 FAM83HQ6ZRV2 1179 aaPredicted RBP18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 BRSK1Q8TDC3 778 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 ELMO2Q96JJ3 720 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 GPN2Q9H9Y4 310 aaPredicted RBP18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 WASH6PQ9NQA3 447 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 STARD5Q9NSY2 213 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 IL17BQ9UHF5 180 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 PKP3Q9Y446 797 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 HEMK1Q9Y5R4 338 aaPredicted RBP18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 ARL5AQ9Y689 179 aa18.66■□□□□ 0.58
TM6SF1-201ENST00000258909 ANKRD34CP0C6C1 535 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 PRKAR1AP10644 381 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 ZNF28P17035 718 aa18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 MAP4P27816 1152 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 PBLDP30039 288 aaPredicted RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 CTNNA1P35221 906 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 NAP1L1P55209 391 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 OTUD4Q01804 1114 aaKnown RBP18.65■□□□□ 0.58
TM6SF1-201ENST00000258909 XRCC4Q13426 336 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms