RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 CEP295NLQ96MC4 621 aa12.22□□□□□ -0.45
USP30-201ENST00000257548 COPS4Q9BT78 406 aa12.22□□□□□ -0.45
USP30-201ENST00000257548 PDZD7Q9H5P4 517 aa12.22□□□□□ -0.45
USP30-201ENST00000257548 ATP13A3Q9H7F0 1226 aa12.22□□□□□ -0.45
USP30-201ENST00000257548 NOX1Q9Y5S8 564 aa12.22□□□□□ -0.45
USP30-201ENST00000257548 MAST2Q6P0Q8 1798 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 SCAMP3O14828 347 aaKnown RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 B3GAT3O94766 335 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 CDK14O94921 469 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 AGTR2P50052 363 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 RAB25P57735 213 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 TWF1Q12792 350 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 NECAB2Q7Z6G3 386 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 SETD9Q8NE22 299 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 STAG3L4Q8TBR4 150 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 LGALS12Q96DT0 336 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 OSBPL10Q9BXB5 764 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 CATSPERBQ9H7T0 1116 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 PDP1Q9P0J1 537 aaPredicted RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 ZNF112Q9UJU3 913 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 ARIH1Q9Y4X5 557 aaPredicted RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 NPEPPSL1A6NEC2 478 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 A8MX80 341 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 TLR5O60602 858 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 RFPL2O75678 378 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 BEST1O76090 585 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 SEMA3DO95025 777 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 IMPDH1P20839 514 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 CASP9P55211 416 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 MBTD1Q05BQ5 628 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 FAM174BQ3ZCQ3 159 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 ZNF362Q5T0B9 420 aaPredicted RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 DESI1Q6ICB0 168 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 ZNF621Q6ZSS3 439 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 GALNT12Q8IXK2 581 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 RPRD1AQ96P16 312 aaPredicted RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 TSSK3Q96PN8 268 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 GFM1Q96RP9 751 aaKnown RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 VAT1Q99536 393 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 KAT8Q9H7Z6 458 aaKnown RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 OLA1Q9NTK5 396 aaKnown RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 ERVK13-1Q9NX77 482 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 TAS2R13Q9NYV9 303 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 POLG2Q9UHN1 485 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 EIF2B4Q9UI10 523 aaKnown RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 MAGEL2Q9UJ55 1249 aa12.21□□□□□ -0.45
USP30-201ENST00000257548 ZNF214Q9UL59 606 aaPredicted RBP12.21□□□□□ -0.45
USP30-201ENST00000257548 A0A1W2PQ67 120 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 H0YJX3 145 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 RAP2AP10114 183 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 COL6A1P12109 1028 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 DSC2Q02487 901 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 SMN1Q16637 294 aaKnown RBP12.21□□□□□ -0.46
USP30-201ENST00000257548 ENPP6Q6UWR7 440 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 LEMD2Q8NC56 503 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 ITPKCQ96DU7 683 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 ZFP42Q96MM3 310 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 NIFKQ9BYG3 293 aaKnown RBP12.21□□□□□ -0.46
USP30-201ENST00000257548 VPS28Q9UK41 221 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 EIF3LQ9Y262 564 aaKnown RBP12.21□□□□□ -0.46
USP30-201ENST00000257548 UBR3Q6ZT12 1888 aa12.21□□□□□ -0.46
USP30-201ENST00000257548 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 STBD1O95210 358 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 LCKP06239 509 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 PFKMP08237 780 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 BMP4P12644 408 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 ITIH1P19827 911 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 CD68P34810 354 aaPredicted RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 ACAP2Q15057 778 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 CPSF6Q16630 551 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP30-201ENST00000257548 SNAP47Q5SQN1 464 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 TPRG1LQ5T0D9 272 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 FUNDC1Q8IVP5 155 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 TAGAPQ8N103 731 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 OTULINQ96BN8 352 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 PCYT2Q99447 389 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 RBM4BQ9BQ04 359 aaKnown RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 TRMOQ9BU70 441 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 RBM4Q9BWF3 364 aaKnown RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 LRRC3Q9BY71 257 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 KRT84Q9NSB2 600 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 PAK1IP1Q9NWT1 392 aaPredicted RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 TOR4AQ9NXH8 423 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
USP30-201ENST00000257548 MAP10Q9P2G4 905 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 UGT2A1Q9Y4X1 527 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 A0A1W2PP18 115 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 CCDC162PA2VCL2 907 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 H3BRB1 525 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 ARIH2O95376 493 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 CD4P01730 458 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 MLLT10P55197 1068 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 HMGCS1Q01581 520 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 MRPL28Q13084 256 aaKnown RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 PTRHD1Q6GMV3 140 aaKnown RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 FAM45BPQ6NSW5 357 aa12.2□□□□□ -0.46
USP30-201ENST00000257548 ZCCHC8Q6NZY4 707 aaKnown RBP12.2□□□□□ -0.46
USP30-201ENST00000257548 GPSM1Q86YR5 675 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms