RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 PNLIPP16233 465 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TPSB2P20231 275 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 ITGALP20701 1170 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 PSMA3P25788 255 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 AKT1P31749 480 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SLC19A1P41440 591 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 ARSDP51689 593 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CLCNKAP51800 687 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CTSCP53634 463 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SESN2P58004 480 aaPredicted RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 B4GALNT1Q00973 533 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 LAMB3Q13751 1172 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 COL9A2Q14055 689 aaPredicted RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TPSAB1Q15661 275 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 GPR33Q49SQ1 333 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 PCID2Q5JVF3 399 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TSTD2Q5T7W7 516 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 LRRC8BQ6P9F7 803 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 IYDQ6PHW0 289 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 ZNF534Q76KX8 674 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 DET1Q7L5Y6 550 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TAS2R42Q7RTR8 314 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SERPINA9Q86WD7 417 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TRAPPC5Q8IUR0 188 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CACTIN-AS1Q8N1I8 211 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 NXPE1Q8N323 547 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SFRP1Q8N474 314 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 DCBLD1Q8N8Z6 715 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 OR13J1Q8NGT2 312 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 GRK7Q8WTQ7 553 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CPT1BQ92523 772 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 ULK4Q96C45 1275 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 THAP11Q96EK4 314 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SGF29Q96ES7 293 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CCDC97Q96F63 343 aaPredicted RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TIMM29Q9BSF4 260 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 ZCCHC2Q9C0B9 1178 aaKnown RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 DDX47Q9H0S4 455 aaKnown RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 OSGEPL1Q9H4B0 414 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SYNDIG1Q9H7V2 258 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 PRDM8Q9NQV8 689 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SCHIP1Q9P0W5 487 aaPredicted RBP8.39□□□□□ -1.07
TMEM258-201ENST00000257262 SLC2A6Q9UGQ3 507 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CRLS1Q9UJA2 301 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 TCAF1Q9Y4C2 921 aa8.39□□□□□ -1.07
TMEM258-201ENST00000257262 CFAP47Q6ZTR5 3102 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 SPEGQ15772 3267 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 TRBV5-4A0A0C4DH59 114 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CCDC162PA2VCL2 907 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 A6NCN8 305 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 PRR19A6NJB7 356 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 RHPN2P1A8MT19 583 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 AP3B1O00203 1094 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 NTN3O00634 580 aaPredicted RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 SGTAO43765 313 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 AVILO75366 819 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CSO75390 466 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 RPLP0P05388 317 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 F3P13726 295 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ATP1B2P14415 290 aaPredicted RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 IDSP22304 550 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ACRV1P26436 265 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 MGAT1P26572 445 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 RPL10P27635 214 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ALDH4A1P30038 563 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CASQ1P31415 396 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 PAFAH1B1P43034 410 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 FNTAP49354 379 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 DRG2P55039 364 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 OR1D5P58170 312 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CRADDP78560 199 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 SARNPP82979 210 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CDK16Q00536 496 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ACVR1Q04771 509 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CACNG1Q06432 222 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 BIRC2Q13490 618 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 SPIDRQ14159 915 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 KCNJ11Q14654 390 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 PPP1R7Q15435 360 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 SEPT7Q16181 437 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 FNBP1LQ5T0N5 605 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ANKRD22Q5VYY1 191 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 UNQ6494/PRO21346Q6UXR6 183 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 NLRP9Q7RTR0 991 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 AMZ2Q86W34 360 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 CCNJLQ8IV13 435 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 KLHL7Q8IXQ5 586 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 PIANPQ8IYJ0 282 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 BEND7Q8N7W2 519 aaPredicted RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 PPHLN1Q8NEY8 458 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 WDR48Q8TAF3 677 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 SLC37A2Q8TED4 501 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 HDAC10Q969S8 669 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 DCUN1D1Q96GG9 259 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ZNF514Q96K75 400 aaPredicted RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 GFM1Q96RP9 751 aaKnown RBP8.38□□□□□ -1.07
TMEM258-201ENST00000257262 COPS8Q99627 209 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 LRRN3Q9H3W5 708 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 ZDHHC3Q9NYG2 299 aa8.38□□□□□ -1.07
TMEM258-201ENST00000257262 BFARQ9NZS9 450 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms