RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 CDH5P33151 784 aaPredicted RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 VITQ6UXI7 678 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 C8AP07357 584 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 CHRM5P08912 532 aaPredicted RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 PLA2G16P53816 162 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 CHIT1Q13231 466 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TCEAL5Q5H9L2 206 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 GHDCQ8N2G8 530 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 ARMC5Q96C12 935 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 C1GALT1C1Q96EU7 318 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 RTKNQ9BST9 563 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 GKN1Q9NS71 199 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TBC1D14Q9P2M4 693 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 ERN1O75460 977 aaKnown RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 C2orf27AQ580R0 203 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 FAM91A1Q658Y4 838 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 TMLHEQ9NVH6 421 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 EVA1BQ9NVM1 165 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 SIRPGQ9P1W8 387 aa18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 AJAP1Q9UKB5 411 aaPredicted RBP18.53■□□□□ 0.56
SMARCC1-201ENST00000254480 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 hCG_2039718K7EN88 272 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 FUT4P22083 530 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 CCNCP24863 283 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 CRYBG2Q8N1P7 616 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 AMER2Q8N7J2 671 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 ZNF433Q8N7K0 673 aaPredicted RBP18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 ACBD6Q9BR61 282 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 MRPS33Q9Y291 106 aaKnown RBP18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 MROH1Q8NDA8 1641 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 PRKCHP24723 683 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 PSMD7P51665 324 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 PCDHB1Q9Y5F3 818 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 IGFALSP35858 605 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 CDH4P55283 916 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 JAM2P57087 298 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 UBXN11Q5T124 520 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 HERVK_113Q902F9 699 aa18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 POLR3BQ9NW08 1133 aaPredicted RBP18.52■□□□□ 0.56
SMARCC1-201ENST00000254480 KELP23276 732 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 SUZ12Q15022 739 aaKnown RBP18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 TAB1Q15750 504 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 TIGD5Q53EQ6 642 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 MZT2BQ6NZ67 158 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 MSANTD2Q6P1R3 559 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 BEND5Q7L4P6 421 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 PIK3C3Q8NEB9 887 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 CDK15Q96Q40 435 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 SDCBP2Q9H190 292 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 NKIRAS2Q9NYR9 191 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 ZNF536O15090 1300 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 REP15Q6BDI9 236 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 TRMT10BQ6PF06 316 aaKnown RBP18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 ADCY4Q8NFM4 1077 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 HEXDCQ8WVB3 486 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 ANKRD27Q96NW4 1050 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 KCND1Q9NSA2 647 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 FZD10Q9ULW2 581 aa18.52■□□□□ 0.55
SMARCC1-201ENST00000254480 A0A1B0GVM2 712 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CARNS1A5YM72 827 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 TCAF2A6NFQ2 919 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 MATN3O15232 486 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 MAPK12P53778 367 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 RPS24P62847 133 aaKnown RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CAP1Q01518 475 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 ZNF662Q6ZS27 426 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 LPGAT1Q92604 370 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 EXD2Q9NVH0 621 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 SSR3Q9UNL2 185 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CCDC182A6NF36 153 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 H3BNH8 94 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 GSC2O15499 205 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 MTX2O75431 263 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 HNMTP50135 292 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 ADGRG6Q86SQ4 1221 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 TMEM139Q8IV31 216 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 FAM81AQ8TBF8 368 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 OAS3Q9Y6K5 1087 aaKnown RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 ATRNO75882 1429 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CASKO14936 926 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CREB1P16220 341 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 ITGA3P26006 1051 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 PGDP52209 483 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 DAOAP59103 153 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 IRF9Q00978 393 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 FOXM1Q08050 763 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CLNKQ7Z7G1 428 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 ECHDC2Q86YB7 292 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 GTPBP3Q969Y2 492 aaKnown RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 CEP295NLQ96MC4 621 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 HNRNPABQ99729 332 aaKnown RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 XPNPEP1Q9NQW7 623 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 PER2O15055 1255 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 SNAPC1Q16533 368 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 SYPL2Q5VXT5 272 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 BEND7Q8N7W2 519 aaPredicted RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 UBR7Q8N806 425 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 FBXO15Q8NCQ5 510 aaPredicted RBP18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 LCN9Q8WX39 176 aa18.51■□□□□ 0.55
SMARCC1-201ENST00000254480 PIP5K1BO14986 540 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms