RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 NDST1P52848 882 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 WDR4P57081 412 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 FMO1Q01740 532 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 EML3Q32P44 896 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 VSTM1Q6UX27 236 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 BANPQ8N9N5 519 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 ACOT12Q8WYK0 555 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 FCRL4Q96PJ5 515 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 MGME1Q9BQP7 344 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 NUDT15Q9NV35 164 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 VPS28Q9UK41 221 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 POLR3HQ9Y535 204 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CNTNAP2Q9UHC6 1331 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 KLRC4O43908 158 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 ABCB7O75027 752 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 OXSR1O95747 527 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 SPARCP09486 303 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 GRIA1P42261 906 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 RFTN2Q52LD8 501 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 AADACL4Q5VUY2 407 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 FAM91A1Q658Y4 838 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 PHF13Q86YI8 300 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 C12orf65Q9H3J6 166 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 RANBP3Q9H6Z4 567 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 TAS2R3Q9NYW6 316 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CNOT6Q9ULM6 557 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CBX4O00257 560 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 TP73O15350 636 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 CYP11A1P05108 521 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLC18A1P54219 525 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 NRG1Q02297 640 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 SFT2D3Q587I9 215 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 IL23RQ5VWK5 629 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 ASB18Q6ZVZ8 466 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 RNF44Q7L0R7 432 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 DPF3Q92784 378 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 TBC1D17Q9HA65 648 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 PADI2Q9Y2J8 665 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 FUOMA2VDF0 154 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLITRK5O94991 958 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 ITGB1P05556 798 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 PVALBP20472 110 aaPredicted RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 KIR3DL1P43629 444 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 YAP1P46937 504 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 TUBP50607 506 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 PRAMEF17Q5VTA0 474 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 SCUBE3Q8IX30 993 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 GPC2Q8N158 579 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZCCHC2Q9C0B9 1178 aaKnown RBP13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 SETD4Q9NVD3 440 aa13.04□□□□□ -0.32
PCDHGA3-201ENST00000253812 MED1Q15648 1581 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TMEM150BA6NC51 233 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 RRN3P2A6NIE6 340 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 DNAJB5O75953 348 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 SLITRK3O94933 977 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PTPN3P26045 913 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 GRK5P34947 590 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TTPAP49638 278 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 THOP1P52888 689 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF181Q2M3W8 571 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 KLHL22Q53GT1 634 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 RETSATQ6NUM9 610 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TAPT1Q6NXT6 567 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF572Q7Z3I7 529 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PLEKHH3Q7Z736 793 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZDHHC21Q8IVQ6 265 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 METTL25Q8N6Q8 603 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 GATAD2BQ8WXI9 593 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 NKD2Q969F2 451 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZYG11BQ9C0D3 744 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 POLR1EQ9GZS1 481 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 H0YJX3 145 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 NARSO43776 548 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 TRUB2O95900 331 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 NCK1P16333 377 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 GNPDA1P46926 289 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 RPP38P78345 283 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PPP3CAQ08209 521 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 CTBP1Q13363 440 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 C4orf46Q504U0 113 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 IDNKQ5T6J7 187 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 ZNF697Q5TEC3 545 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 DPY19L3Q6ZPD9 716 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 UNC5BQ8IZJ1 945 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 SPATA20Q8TB22 786 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 PIGKQ92643 395 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 FBXO32Q969P5 355 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 WDR6Q9NNW5 1121 aaKnown RBP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 GMIPQ9P107 970 aa13.03□□□□□ -0.32
PCDHGA3-201ENST00000253812 CPA4Q9UI42 421 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms