RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 C16orf72Q14CZ0 275 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 GTDC1Q4AE62 458 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 XKR5Q6UX68 686 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 STK32CQ86UX6 486 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SCML4Q8N228 414 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SFRP1Q8N474 314 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 DBF4BQ8NFT6 615 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 GFM2Q969S9 779 aaKnown RBP21.07■□□□□ 0.96
TRIM28-201ENST00000253024 C8orf48Q96LL4 319 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 HACD3Q9P035 362 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 PCDHA9Q9Y5H5 950 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 NLRC5Q86WI3 1866 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 A0A1W2PP18 115 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 A0A1W2PPW3 197 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 TMCC1O94876 653 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SLC2A4P14672 509 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 PRKACGP22612 351 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 DNAJB1P25685 340 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 VARSP26640 1264 aaKnown RBP21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SLC11A1P49279 550 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 IL2P60568 153 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 RPL38P63173 70 aaKnown RBP21.07■□□□□ 0.96
TRIM28-201ENST00000253024 HPCAP84074 193 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 TGFBIQ15582 683 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 ATP6AP1LQ52LC2 224 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 Q6ZSR9 355 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 PHACTR4Q8IZ21 702 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 LRRC43Q8N309 656 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 PROKR1Q8TCW9 393 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SKA2Q8WVK7 121 aaPredicted RBP21.07■□□□□ 0.96
TRIM28-201ENST00000253024 GPR63Q9BZJ6 419 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 SEPT3Q9UH03 358 aa21.07■□□□□ 0.96
TRIM28-201ENST00000253024 FAF1Q9UNN5 650 aaPredicted RBP21.07■□□□□ 0.96
TRIM28-201ENST00000253024 TCF3P15923 654 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 OR1D2P34982 312 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ABRAXAS2Q15018 415 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 GLYATQ6IB77 296 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 BEND5Q7L4P6 421 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 LYSMD3Q7Z3D4 306 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ANKRD46Q86W74 232 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 FAM126BQ8IXS8 530 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 CLEC4FQ8N1N0 589 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 C12orf43Q96C57 262 aaKnown RBP21.06■□□□□ 0.96
TRIM28-201ENST00000253024 HOPXQ9BPY8 73 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-201ENST00000253024 THUMPD3Q9BV44 507 aaKnown RBP21.06■□□□□ 0.96
TRIM28-201ENST00000253024 RNF38Q9H0F5 515 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 CA8P35219 290 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ATP6V0D1P61421 351 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 DSC1Q08554 894 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 LKAAEAR1Q8TD35 194 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 CD200R1Q8TD46 325 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 UROC1Q96N76 676 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 TRIB3Q96RU7 358 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 C17orf80Q9BSJ5 609 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ANKRD60Q9BZ19 345 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 SMURF2Q9HAU4 748 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 PDFQ9HBH1 243 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ACTR3BQ9P1U1 418 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ANAPC2Q9UJX6 822 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 DFNA5O60443 496 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 ACSL4O60488 711 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 CD247P20963 164 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 HRH2P25021 359 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 PSMD8P48556 350 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 TAF12Q16514 161 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 IMPG1Q17R60 797 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 TMEM126BQ8IUX1 230 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 KRTCAP2Q8N6L1 136 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 OR4F6Q8NGB9 312 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 BCL7CQ8WUZ0 217 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-201ENST00000253024 EID2BQ96D98 161 aa21.06■□□□□ 0.96
TRIM28-201ENST00000253024 NLE1Q9NVX2 485 aaPredicted RBP21.06■□□□□ 0.96
TRIM28-201ENST00000253024 LCHNA4D1U4 455 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 ATE1O95260 518 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 TSPAN12O95859 305 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 FGF4P08620 206 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 BMP2P12643 396 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 IL7RP16871 459 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 LPOP22079 712 aaPredicted RBP21.05■□□□□ 0.96
TRIM28-201ENST00000253024 HTR7P34969 479 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 ATP5C1P36542 298 aaKnown RBP21.05■□□□□ 0.96
TRIM28-201ENST00000253024 CCT8P50990 548 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 GALNT1Q10472 559 aaPredicted RBP21.05■□□□□ 0.96
TRIM28-201ENST00000253024 PLD1Q13393 1074 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 AP5B1Q2VPB7 878 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 LDLRAP1Q5SW96 308 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 ITIH5Q86UX2 942 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 EGFL6Q8IUX8 553 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 BBS5Q8N3I7 341 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 ANKFN1Q8N957 763 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 GAB3Q8WWW8 586 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 MYRFLQ96LU7 910 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 ZNF599Q96NL3 588 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 MUS81Q96NY9 551 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 CIPCQ9C0C6 399 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 PTPRDP23468 1912 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.05■□□□□ 0.96
TRIM28-201ENST00000253024 UNCXA6NJT0 531 aa21.05■□□□□ 0.96
TRIM28-201ENST00000253024 DRGXA6NNA5 263 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms