RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 FOXM1Q08050 763 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 TRIP4Q15650 581 aaPredicted RBP18.76■□□□□ 0.59
SNX4-201ENST00000251775 SPATS1Q496A3 300 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 CTXN3Q4LDR2 81 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 IL31Q6EBC2 164 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 ITIH5Q86UX2 942 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 FBXO32Q969P5 355 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 MUC13Q9H3R2 512 aa18.76■□□□□ 0.59
SNX4-201ENST00000251775 OAS3Q9Y6K5 1087 aaKnown RBP18.76■□□□□ 0.59
SNX4-201ENST00000251775 PIP5K1BO14986 540 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 LDB2O43679 373 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 RSL1D1O76021 490 aaKnown RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 LIPEQ05469 1076 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 OTUD3Q5T2D3 398 aaPredicted RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 FKBP10Q96AY3 582 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 ZNF641Q96N77 438 aaPredicted RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 TRIM54Q9BYV2 358 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 MFSD1Q9H3U5 465 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 SDR39U1Q9NRG7 319 aaPredicted RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 DGKBQ9Y6T7 804 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 LOC285095A0A1B0GVY8 99 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 CLDN25C9JDP6 229 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 WISP3O95389 354 aaPredicted RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 UMPSP11172 480 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 ACVRL1P37023 503 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 FOXA1P55317 472 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 ARPP19P56211 112 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 POLD3Q15054 466 aaPredicted RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 BLOC1S3Q6QNY0 202 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 PCSK9Q8NBP7 692 aaKnown RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 LEMD2Q8NC56 503 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 TWIST2Q8WVJ9 160 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 TSPAN17Q96FV3 270 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 SEPHS2Q99611 448 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 KCTD14Q9BQ13 255 aaPredicted RBP18.75■□□□□ 0.59
SNX4-201ENST00000251775 MARCH2Q9P0N8 246 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 PCDHGA11Q9Y5H2 935 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 ST14Q9Y5Y6 855 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 V9GYQ6 96 aa18.75■□□□□ 0.59
SNX4-201ENST00000251775 TMEM88BA6NKF7 163 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 DRGXA6NNA5 263 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CDK14O94921 469 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CRHBPP24387 322 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 GSTM2P28161 218 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 MAGEA11P43364 429 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 FAM189BP81408 668 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 TAF10Q12962 218 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 PTPRCAPQ14761 206 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 ZNF846Q147U1 533 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 COQ5Q5HYK3 327 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 C10orf120Q5SQS8 335 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 TMEM214Q6NUQ4 689 aaKnown RBP18.74■□□□□ 0.59
SNX4-201ENST00000251775 PIWIL3Q7Z3Z3 882 aaKnown RBP18.74■□□□□ 0.59
SNX4-201ENST00000251775 ISCA2Q86U28 154 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 SPARTQ8N0X7 666 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CADM3Q8N126 398 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 OSCP1Q8WVF1 389 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 RPRD1AQ96P16 312 aaPredicted RBP18.74■□□□□ 0.59
SNX4-201ENST00000251775 ING2Q9H160 280 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 USP22Q9UPT9 525 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 SLC12A8A0AV02 714 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 MUSKO15146 869 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 RAMP2O60895 175 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 BCAS1O75363 584 aaPredicted RBP18.74■□□□□ 0.59
SNX4-201ENST00000251775 JRKO75564 520 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 HPCAL1P37235 193 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 IL10RBQ08334 325 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 SREBF2Q12772 1141 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 PERM1Q5SV97 790 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 GPR158Q5T848 1215 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 SLC16A12Q6ZSM3 486 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 R3HCC1LQ7Z5L2 792 aaKnown RBP18.74■□□□□ 0.59
SNX4-201ENST00000251775 GALNT7Q86SF2 657 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 PIM3Q86V86 326 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 GABPB2Q8TAK5 448 aaPredicted RBP18.74■□□□□ 0.59
SNX4-201ENST00000251775 SLC22A17Q8WUG5 538 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 BIRC7Q96CA5 298 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 TBATAQ96M53 351 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CCDC138Q96M89 665 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 SEMA3CQ99985 751 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CHID1Q9BWS9 393 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CRISPLD1Q9H336 500 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 TUBB1Q9H4B7 451 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 NTN4Q9HB63 628 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 CRYL1Q9Y2S2 319 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 THSD7BQ9C0I4 1608 aa18.74■□□□□ 0.59
SNX4-201ENST00000251775 ASPDHA6ND91 283 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 NR4A1P22736 598 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 GJA8P48165 433 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 HERVK_113P63132 956 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 SERINC3Q13530 473 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 NFYCQ13952 458 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 FAM171A1Q5VUB5 890 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 FRA10AC1Q70Z53 315 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 FAM193BQ96PV7 902 aaPredicted RBP18.73■□□□□ 0.59
SNX4-201ENST00000251775 PSD2Q9BQI7 771 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 BDH2Q9BUT1 245 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 FUNDC2Q9BWH2 189 aa18.73■□□□□ 0.59
SNX4-201ENST00000251775 ERVK-6Q9BXR3 956 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms