RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MRPS17Q9Y2R5 130 aaKnown RBP16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 NUMA1Q14980 2115 aa16.8■□□□□ 0.28
CDKN1A-201ENST00000244741 A0A0J9YYE9 177 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 NPC1O15118 1278 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 TRBC1P01850 177 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CRABP2P29373 138 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 SERPINB5P36952 375 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CD151P48509 253 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 ZXDAP98168 799 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 PRKAA1Q13131 559 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CST6Q15828 149 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 TJAP1Q5JTD0 557 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 KIAA0930Q6ICG6 404 aaPredicted RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 LYSMD3Q7Z3D4 306 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 GLT6D1Q7Z4J2 308 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 HPS6Q86YV9 775 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 PYDC1Q8WXC3 89 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CCDC124Q96CT7 223 aaKnown RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 ZNF184Q99676 751 aaPredicted RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 RTKNQ9BST9 563 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 NUF2Q9BZD4 464 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 RSPH9Q9H1X1 276 aaPredicted RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.79■□□□□ 0.281e-9■□□□□ 10.1
CDKN1A-201ENST00000244741 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 DNAH14Q0VDD8 3507 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 TCRBV21S2A2A0A5A6 115 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CLDN7O95471 211 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CNTN1Q12860 1018 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 TMEM31Q5JXX7 168 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 NEPROQ6NW34 567 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 IRGCQ6NXR0 463 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 AAGABQ6PD74 315 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 CNSTQ6PJW8 725 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 TRMT11Q7Z4G4 463 aaKnown RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 AADATQ8N5Z0 425 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 PNPLA1Q8N8W4 532 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 TMIEQ8NEW7 156 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 OR13C4Q8NGS5 318 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 EID2BQ96D98 161 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 UHRF1Q96T88 793 aaPredicted RBP16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 MMP17Q9ULZ9 603 aa16.79■□□□□ 0.28
CDKN1A-201ENST00000244741 C1orf232A0A0U1RR37 186 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 A0A1W2PP55 124 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 RNASEH1O60930 286 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 JUNP05412 331 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 PAMP19021 973 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 XPAP23025 273 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 PAX7P23759 505 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 PIK3R1P27986 724 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 RPS14P62263 151 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 MRPS35P82673 323 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 TBL3Q12788 808 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 CRY1Q16526 586 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 ZNF789Q5FWF6 425 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 CAPRIN2Q6IMN6 1127 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 FBXL19Q6PCT2 694 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 BRAT1Q6PJG6 821 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 RNF111Q6ZNA4 994 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 DSG4Q86SJ6 1040 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 CCNYL1Q8N7R7 359 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 OR2T3Q8NH03 318 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 GANCQ8TET4 914 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 HEXDCQ8WVB3 486 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 HMGB4Q8WW32 186 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 DYRK4Q9NR20 520 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 B4GALT6Q9UBX8 382 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 POMPQ9Y244 141 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 ZDBF2Q9HCK1 2354 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 VPS13AQ96RL7 3174 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 DPPA5A6NC42 116 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 LDB2O43679 373 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 EOGTQ5NDL2 527 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 TCHHL1Q5QJ38 904 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 RBM20Q5T481 1227 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 FAM124AQ86V42 546 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 FBXW8Q8N3Y1 598 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 SLC26A7Q8TE54 656 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 LRIG1Q96JA1 1093 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 GPR63Q9BZJ6 419 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 MRPL46Q9H2W6 279 aaKnown RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 SUDS3Q9H7L9 328 aaPredicted RBP16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 ZNF711Q9Y462 761 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 DMDP11532 3685 aa16.78■□□□□ 0.28
CDKN1A-201ENST00000244741 TECTAO75443 2155 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 UPK3BL1B0FP48 263 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 UPK3BL2E5RIL1 263 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 RNASEH2AO75792 299 aaKnown RBP16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 LHCGRP22888 699 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 ITGB7P26010 798 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 DRD3P35462 400 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 P2RY2P41231 377 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 HK2P52789 917 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 LRRC32Q14392 662 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 TMEM198Q66K66 360 aa16.77■□□□□ 0.28
CDKN1A-201ENST00000244741 LRRC66Q68CR7 880 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms