RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 FLRT1Q9NZU1 646 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 TMPRSS11EQ9UL52 423 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 ST3GAL5Q9UNP4 418 aa7.89□□□□□ -1.15
CXCR4-201ENST00000241393 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.89□□□□□ -1.15
CXCR4-201ENST00000241393 FNDC1Q4ZHG4 1894 aaPredicted RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 TRIP12Q14669 1992 aaPredicted RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 M0QZQ0 153 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 IRAK2O43187 625 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 HSPA4LO95757 839 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 JCHAINP01591 159 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 PF4V1P10720 104 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ANPEPP15144 967 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ZNF28P17035 718 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 SERPINB5P36952 375 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 KPNA2P52292 529 aaKnown RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 GEMP55040 296 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 XIAPP98170 497 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 GTF2H3Q13889 308 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 EIF4HQ15056 248 aaKnown RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 CFAP157Q5JU67 520 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 CERCAMQ5T4B2 595 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 PHF19Q5T6S3 580 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 MANEALQ5VSG8 457 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 LIPMQ5VYY2 423 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 TRIM68Q6AZZ1 485 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 KLHDC10Q6PID8 442 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 CES3Q6UWW8 571 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ZC3HC1Q86WB0 502 aaKnown RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 TCEAL8Q8IYN2 117 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 DQX1Q8TE96 717 aaKnown RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 PDCD6IPQ8WUM4 868 aaKnown RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 NRG4Q8WWG1 115 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 NR1H4Q96RI1 486 aaPredicted RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 KCNK16Q96T55 309 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 PKMYT1Q99640 499 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 RTKNQ9BST9 563 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ADI1Q9BV57 179 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 SENP6Q9GZR1 1112 aaPredicted RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 DRC3Q9H069 523 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ILKAPQ9H0C8 392 aaPredicted RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 VCX3BQ9H321 246 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ENTPD7Q9NQZ7 604 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 TMEM30AQ9NV96 361 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 PNPOQ9NVS9 261 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 PIH1D1Q9NWS0 290 aaKnown RBP7.88□□□□□ -1.15
CXCR4-201ENST00000241393 NDE1Q9NXR1 346 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 CPA4Q9UI42 421 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 TLK1Q9UKI8 766 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 ARHGAP26Q9UNA1 814 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 NEU3Q9UQ49 428 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 RAP2CQ9Y3L5 183 aa7.88□□□□□ -1.15
CXCR4-201ENST00000241393 SCN10AQ9Y5Y9 1956 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GOLGA8QA0A0J9YX86 632 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 SH3D21A4FU49 640 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GOLGA8OA6NCC3 632 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 ARL5CA6NH57 179 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GOLGA8NF8WBI6 632 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 MATN2O00339 956 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 MATN3O15232 486 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 HDAC3O15379 428 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 USP12O75317 370 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 DDHD2O94830 711 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 OSMP13725 252 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 TYMPP19971 482 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 CRABP2P29373 138 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 ARRB2P32121 409 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 CACNA2D1P54289 1103 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 RPL26P61254 145 aaKnown RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 BEX3Q00994 111 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 MGAT3Q09327 533 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GRIK3Q13003 919 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 PRKAA1Q13131 559 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 SLC12A1Q13621 1099 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 HERC3Q15034 1050 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 SH2D4BQ5SQS7 431 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 KIAA0408Q6ZU52 694 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 FAM124AQ86V42 546 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 SERINC5Q86VE9 423 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 ARHGAP12Q8IWW6 846 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 KIRREL3Q8IZU9 778 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 ATPAF2Q8N5M1 289 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 CPSF7Q8N684 471 aaKnown RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GABPB2Q8TAK5 448 aaPredicted RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 STYXQ8WUJ0 223 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 AGAP2Q99490 1192 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 TBL1YQ9BQ87 522 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 RTP3Q9BQQ7 232 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GATA5Q9BWX5 397 aaPredicted RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 C1QTNF1Q9BXJ1 281 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 UPF3AQ9H1J1 476 aaKnown RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 SMOC2Q9H3U7 446 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 COG4Q9H9E3 785 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 GLOD4Q9HC38 313 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 CHRAC1Q9NRG0 131 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 IARS2Q9NSE4 1012 aaKnown RBP7.87□□□□□ -1.15
CXCR4-201ENST00000241393 ABCC13Q9NSE7 274 aa7.87□□□□□ -1.15
CXCR4-201ENST00000241393 PRPF19Q9UMS4 504 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms