RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 TOP3BO95985 862 aaKnown RBP7.15□□□□□ -1.26
CPS1-201ENST00000233072 CDKN2BP42772 138 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 BLKP51451 505 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 GNA12Q03113 381 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 TRIM32Q13049 653 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 TREML2Q5T2D2 321 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 PAMR1Q6UXH9 720 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 TMPRSS11BQ86T26 416 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 LINC00471Q8N535 108 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 POC5Q8NA72 575 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 DENND1AQ8TEH3 1009 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 C17orf50Q8WW18 174 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 GPATCH1Q9BRR8 931 aaKnown RBP7.15□□□□□ -1.26
CPS1-201ENST00000233072 CHID1Q9BWS9 393 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 TFB2MQ9H5Q4 396 aaKnown RBP7.15□□□□□ -1.26
CPS1-201ENST00000233072 POLMQ9NP87 494 aaPredicted RBP7.15□□□□□ -1.26
CPS1-201ENST00000233072 HCN3Q9P1Z3 774 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 CDH22Q9UJ99 828 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 PCDHGB1Q9Y5G3 927 aa7.15□□□□□ -1.26
CPS1-201ENST00000233072 ZFP37Q9Y6Q3 630 aaPredicted RBP7.15□□□□□ -1.26
CPS1-201ENST00000233072 SLC38A8A6NNN8 435 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 CAPN14A8MX76 684 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 CASKO14936 926 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 PLIN3O60664 434 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 ERAL1O75616 437 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 OR5F1O95221 314 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 PCCBP05166 539 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 DNASE1L1P49184 302 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 SLC7A2P52569 658 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 SRP54P61011 504 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 ROR2Q01974 943 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 CLCQ05315 142 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TAF10Q12962 218 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 LPIN1Q14693 890 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 PTPN20Q4JDL3 420 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 C9orf64Q5T6V5 341 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 PLPP4Q5VZY2 271 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 FAM131AQ6UXB0 335 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 RBM44Q6ZP01 1051 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 MAB21L3Q8N8X9 362 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 C11orf65Q8NCR3 313 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 OR52K2Q8NGK3 314 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 CAPSLQ8WWF8 208 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 MGME1Q9BQP7 344 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 MIR1-1HGQ9H1L0 117 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 EHD1Q9H4M9 534 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 HHATLQ9HCP6 504 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 PDP1Q9P0J1 537 aaPredicted RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 MARK1Q9P0L2 795 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 GNEQ9Y223 722 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3DA0A087WVF3 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3IA0A087WXS9 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3EA0A087X179 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3KA0A087X1G2 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3FA6NER0 549 aaPredicted RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3LB9A6J9 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 LGR5O75473 907 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3HP0C7X1 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 ITGB5P18084 799 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 HOXC12P31275 282 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 MTTPP55157 894 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 HSF2Q03933 536 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3GQ6DHY5 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 GLYATQ6IB77 296 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 KIAA0930Q6ICG6 404 aaPredicted RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3CQ6IPX1 549 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 MSANTD2Q6P1R3 559 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 RHBDF2Q6PJF5 856 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TBC1D3Q8IZP1 549 aaPredicted RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 CERS5Q8N5B7 392 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 IL31RAQ8NI17 732 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 JOSD2Q8TAC2 188 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 C15orf40Q8WUR7 153 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 KBTBD7Q8WVZ9 684 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 TSEN15Q8WW01 171 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 FCRL4Q96PJ5 515 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 HAPLN3Q96S86 360 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 MCMBPQ9BTE3 642 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 SPATA9Q9BWV2 254 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 SLC35C2Q9NQQ7 365 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 IMP3Q9NV31 184 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 PNPOQ9NVS9 261 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 SMPD3Q9NY59 655 aaPredicted RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 PPIEQ9UNP9 301 aaKnown RBP7.15□□□□□ -1.27
CPS1-201ENST00000233072 PEX16Q9Y5Y5 336 aa7.15□□□□□ -1.27
CPS1-201ENST00000233072 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.14□□□□□ -1.27
CPS1-201ENST00000233072 SLC30A4O14863 429 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 SEPT4O43236 478 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 TLX3O43711 291 aaPredicted RBP7.14□□□□□ -1.27
CPS1-201ENST00000233072 BANF1O75531 89 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 THRBP10828 461 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 DBTP11182 482 aaKnown RBP7.14□□□□□ -1.27
CPS1-201ENST00000233072 IL12BP29460 328 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 MNDAP41218 407 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 CTSKP43235 329 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 HCAR3P49019 387 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 SCRN3Q0VDG4 424 aa7.14□□□□□ -1.27
CPS1-201ENST00000233072 CPSF6Q16630 551 aaKnown RBP eCLIP7.14□□□□□ -1.27
CPS1-201ENST00000233072 TYSND1Q2T9J0 566 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms