RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 GPR20Q99678 358 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 RBM4BQ9BQ04 359 aaKnown RBP14.4□□□□□ -0.1
PRDM4-201ENST00000228437 TMEM246Q9BRR3 403 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 TRMOQ9BU70 441 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 RBM4Q9BWF3 364 aaKnown RBP14.4□□□□□ -0.1
PRDM4-201ENST00000228437 OGDHLQ9ULD0 1010 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 CARD8Q9Y2G2 431 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 NUP214P35658 2090 aaPredicted RBP14.4□□□□□ -0.1
PRDM4-201ENST00000228437 CCDC162PA2VCL2 907 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 EFCAB10A6NFE3 127 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 FAM47E-STBD1D6RA91 191 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 H3BRB1 525 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 MT-ND2P03891 347 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 PIM1P11309 404 aaPredicted RBP14.4□□□□□ -0.1
PRDM4-201ENST00000228437 PROZP22891 400 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 TOP3AQ13472 1001 aaPredicted RBP14.4□□□□□ -0.1
PRDM4-201ENST00000228437 UNC50Q53HI1 259 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 ZNF362Q5T0B9 420 aaPredicted RBP14.4□□□□□ -0.1
PRDM4-201ENST00000228437 PROSER1Q86XN7 944 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 OR13F1Q8NGS4 319 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 OR52J3Q8NH60 311 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 TSSK3Q96PN8 268 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 ELP3Q9H9T3 547 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 MEAF6Q9HAF1 191 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 WWOXQ9NZC7 414 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 RREB1Q92766 1687 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 ARFGEF1Q9Y6D6 1849 aa14.4□□□□□ -0.1
PRDM4-201ENST00000228437 TYW5A2RUC4 315 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 TLR5O60602 858 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 F9P00740 461 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 MSH3P20585 1137 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 CRY1Q16526 586 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 FAM174BQ3ZCQ3 159 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 DESI1Q6ICB0 168 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF621Q6ZSS3 439 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 GPRIN3Q6ZVF9 776 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 METTL23Q86XA0 190 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 GPSM1Q86YR5 675 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 OR13C4Q8NGS5 318 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 LGALS12Q96DT0 336 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ZFP42Q96MM3 310 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ABCB9Q9NP78 766 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 FAM118AQ9NWS6 357 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 COL22A1Q8NFW1 1626 aaPredicted RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 A0A1W2PP18 115 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PCP4L1A6NKN8 68 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 CPNE3O75131 537 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 RFPL2O75678 378 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SERPINA1P01009 418 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 HLA-DQB2P05538 268 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 LCKP06239 509 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 IL12RB1P42701 662 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SMN1Q16637 294 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ZNF678Q5SXM1 525 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 CLEC14AQ86T13 490 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SLC44A2Q8IWA5 706 aaPredicted RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 LRRC3Q9BY71 257 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SYTL2Q9HCH5 934 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 DNMT3AQ9Y6K1 912 aaPredicted RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 CDC7O00311 574 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SCAMP3O14828 347 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 B3GAT3O94766 335 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 CSF2P04141 144 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SBK3P0C264 359 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 UMPSP11172 480 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 HLA-DPA1P20036 260 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PRDX3P30048 256 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 CASP9P55211 416 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 HERVK_113P63132 956 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 AQP6Q13520 282 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 TPRG1LQ5T0D9 272 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PTRHD1Q6GMV3 140 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PAQR3Q6TCH7 311 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 UNC93AQ86WB7 457 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ALDH16A1Q8IZ83 802 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 TMEM174Q8WUU8 243 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 KHSRPQ92945 711 aaKnown RBP eCLIP14.39□□□□□ -0.117e-10■■■■■ 30.5
PRDM4-201ENST00000228437 FCRL2Q96LA5 508 aaPredicted RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 GPR21Q99679 349 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ERVK-6Q9BXR3 956 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SPATC1LQ9H0A9 340 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 KRT84Q9NSB2 600 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PAK1IP1Q9NWT1 392 aaPredicted RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 ZSCAN5BA6NJL1 495 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 A8MX80 341 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 SLC22A1O15245 554 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 DFNA5O60443 496 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 PRSS56P0CW18 603 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 COL6A1P12109 1028 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 POU2F1P14859 743 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 HMGCS1Q01581 520 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 TWF1Q12792 350 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 RBM48Q5RL73 367 aaKnown RBP14.39□□□□□ -0.11
PRDM4-201ENST00000228437 TSTD2Q5T7W7 516 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 NECAB2Q7Z6G3 386 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 GALNT12Q8IXK2 581 aa14.39□□□□□ -0.11
PRDM4-201ENST00000228437 DNERQ8NFT8 737 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms